Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2201 ATGGACACCGACGACGAGACACTATTGGACGAGAAAGCAAGGAGAACGAGAGATCTGCTTGCCAGTTTCTACTCTCCAATTCCTTCAGCGTCCTCCAACAATCCTTTTTCCAAACACGCCTCACCCGATGACATCAATTCCTCTTCCTTCCAACCTGATCAGTACATGAAAATCATGGCGCGAAAGTCCAGTTTAGAAGGTCTACTCCAGAGGCACGTTGAAATGGTAGCTGAAATCAAGAATCTGGATACTGACTTGCAAATGCTCGTCTACGAGAATTATAATAAGTTTATCTGCGCTACAGATACTATAAAGAGGATGAAGAGTAATATTTTGGGGATGGAAGAAAATATGGAACAGCTTCTCGAGAGGATAATGTCTGTACAATCAAGAAGTGACAGTGTTAACACTTCTCTGTGCGAAAATAGGGAGCATATAGAGAAAATGCACCGGACATGCAATCTTCTTCGTAAAATTCAGTTCATATATGACCTACCTGATAGATTAGGCAAGTGCATCAAGTCTGAGGCCTATGCAGATGCAGTCAGGTTCTACATCGGTGCAATGCCAATTTTTAAGGCCTATGGAGATTCATCATTCCAAGATTGTAAGCGAGCATCTGAAGAAGCAATAGCTATCATAGTAAAAAATTTGCAGGGAAAAGTATTTTCAGATTCTGAATCAATGCAAGTGAGAGCCGAGGCTGCAGTTCTCTTGAAACAGTTGAATTTTCCTGTGGACTATTTGAAGACAAAGCTACTAGAGAAGTTGGAGCTTTCGCTTAGAGACATGCAGTTTATAACTGAAGTAATGGAGAATGATTCTCCCTCTGCTCACGAGGCGTCCATTCACGAGTTGGTGGAGGCCATTCGTGCATTTCGGGTAATATTTCCAGATTCAGAAAAGCAATTAGTTCAACTTGCTCAAGACCTACTCACCAGACACTTTCTAATCATAGAAGAGTATGTAAAGACACGGATTTGTTCGGAAGATCTACTTGGTGTTCTTAGAGTTATCTGGAATGCCGTGCTCCGAATGGATGAAGTCTTAGAGGAAGTATCTCTCTCTAATCATTCTCTTGAGGCTACCAAGGATGCTGTCAAGCTGTATATTAGAAGTGCATTTTCTCATCTAACGCAAGACATCTCAGATCACCTCTTAAAAGTGCTGAAACGGGGTGGAGCAGAGGAGTACTCACTGGAAGTTGCCTTAGATGCTAGCATCAAAGCAGTTTTAGACGGAGGCAGGAACGTTTTGCTGGATATCCACAAAATTCTAGAAGACAACTTAGAGATTGTAGATAAACTAAAAGAGTTAATAATTGATTGGGTTCAACAAGGATATCAAGACTTTTTTAGGGAACTTGAGGTTCAGTTCATATCGTTTTTAGGAAGAAACAATTCTTCAGCTACTCCAAGTCATGGTTTGATGGAGGGAGCTCAAGGTGTCAAAGCCTTTCCTAGCCTTGTTCTAGTGTTGGCCCAACTGTCTGCTTTTATTGGACAAACTGCAATACCAAAAATCACCGAGGAATTAGCAGCTTCCTTTTCTCAAGGAAGTGTTGGAGGTTATGAATATGGACTGTCCTTTGTTCCTGGAGTGATCTCTCAAAAATTTAGGGCAGCTGGTGAAAAATTCTTGCAGCTGCTCGACATCGACCCAGGTTCGAGAGACTTGACATTGGCTCGGGTCTGCTTGGCTCAAAATTGGCCCGGGCCCAATAGACTCAACAACGACGCGAGCCCGCTCGACTCGACATCTGGGCCCGTTCAGCTCAACATCGGCCCGGGTTCAAGAGACTCAACATTGGCTCGGGTCTGCTTGGCTCGAAATTGGCCCGGGCACAATCAACTCAACAACGACGCGGGCTCGCTCGATTCGACATCAGTCAGGGCTATCCCGGCTTGA 1908 0.4382 MDTDDETLLDEKARRTRDLLASFYSPIPSASSNNPFSKHASPDDINSSSFQPDQYMKIMARKSSLEGLLQRHVEMVAEIKNLDTDLQMLVYENYNKFICATDTIKRMKSNILGMEENMEQLLERIMSVQSRSDSVNTSLCENREHIEKMHRTCNLLRKIQFIYDLPDRLGKCIKSEAYADAVRFYIGAMPIFKAYGDSSFQDCKRASEEAIAIIVKNLQGKVFSDSESMQVRAEAAVLLKQLNFPVDYLKTKLLEKLELSLRDMQFITEVMENDSPSAHEASIHELVEAIRAFRVIFPDSEKQLVQLAQDLLTRHFLIIEEYVKTRICSEDLLGVLRVIWNAVLRMDEVLEEVSLSNHSLEATKDAVKLYIRSAFSHLTQDISDHLLKVLKRGGAEEYSLEVALDASIKAVLDGGRNVLLDIHKILEDNLEIVDKLKELIIDWVQQGYQDFFRELEVQFISFLGRNNSSATPSHGLMEGAQGVKAFPSLVLVLAQLSAFIGQTAIPKITEELAASFSQGSVGGYEYGLSFVPGVISQKFRAAGEKFLQLLDIDPGSRDLTLARVCLAQNWPGPNRLNNDASPLDSTSGPVQLNIGPGSRDSTLARVCLARNWPGHNQLNNDAGSLDSTSVRAIPA* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2201 635 MobiDBLite consensus disorder prediction 25 48 - -
Pvu1g2201 635 Coils Coil 104 131 - -
Pvu1g2201 635 PANTHER LOW QUALITY PROTEIN: VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 51 HOMOLOG 5 549 - -
Pvu1g2201 635 PANTHER UNCHARACTERIZED 5 549 IPR014812 -
Pvu1g2201 635 Pfam Vps51/Vps67 45 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2201 Pvu-Chr1 47612811 47619347 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2201 K20296 - gmx:100818891 756.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2201 1 47612811 47619347 Pvu1g2201 1 47612811 47619347 ECH
Pvu1g2201 1 47612811 47619347 Pvu7g2205 7 45329634 45339409 PCT