Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2196 ATGGGAAACCAAATAGCCAGAGATCATGCCACCGGCAAAATCGTCTACTGGGATGGTTCGGTTCGAGAGTTTCGCGAACCGCTAACGGCGGCGGAGCTCATGATGGAGCACCCACAACAGGTTGTGCTTGATTTTCATTCCGCCGTGAAGCAGAAAAGGCCAGCGCCGCTGCCAGCGGACCAAAAGCTAGAGATGAAGAAAACCTATGTGATGGTTCCGGTGAAGCCAGGGAAGCCTGTGGGGTTGAGCAGCCAGGATAGTCGCCGCATTCTCTTCATCGTTAACTCTGCTCTGCATTCCAAGTATTTTGTTTCTTCTTCGGGGTTTCTTCCTTGGCTTGCAGGGCTGTTCCACCCTGAGAGAGAGGTTGCAGTGTTGCAGAATAAGGAAGCGGCGGAGAACGCCGAAGAGAAGTACGGTTTCTCTGAGTTTTTGCCAGAAATGGTGGAAGGGAGACCGGAGTATTTGAGTAGGCAGTTGTCGGGGAAAGGTTGGAAGCCTAGTTTGGACACCATTAAAGAGAAGAAGGTTAACACAAAACTATCTCGATGGTTATTGTTCCTCAAAACCTTTACTGCTGCAAAGATTTAG 591 0.4992 MGNQIARDHATGKIVYWDGSVREFREPLTAAELMMEHPQQVVLDFHSAVKQKRPAPLPADQKLEMKKTYVMVPVKPGKPVGLSSQDSRRILFIVNSALHSKYFVSSSGFLPWLAGLFHPEREVAVLQNKEAAENAEEKYGFSEFLPEMVEGRPEYLSRQLSGKGWKPSLDTIKEKKVNTKLSRWLLFLKTFTAAKI* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2196 196 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 184 - -
Pvu1g2196 196 Pfam PADRE domain 1 174 IPR025322 -
Pvu1g2196 196 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 1 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2196 Pvu-Chr1 47575709 47576299 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2196 - - var:108328709 327.405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2196 1 47575709 47576299 Pvu1g2196 1 47575709 47576299 ECH
Pvu1g2196 1 47575709 47576299 Pvu7g2210 7 45394023 45395064 PCT