Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2193 ATGGATGCTCTGTGTTTACACAGTAGCATCTGTAAGATAGCTCCTTCGACCATTCCCATTACTGCAACTGCACGCGCAAATGATTACGCGTCGCAGTCTCAGGTGAGCACGGTGGGACGCTCCCTGTTTTCCAGATTCTCCTTTAGATACCCTTTGACGTCTTTATGGCCACAACAACTCACGGGGAATGCCTCCGGCTACAATGGTCTCGCCGTAGACGACGCCGTTTTGGCAGAGAATGAAACTAAAGAAGGAGAGGGACAAAACGGGAATTCGGTTTTCAAGATTTTTCATGCAAGGTCTGTTTGGAGCGTGGAACAGAGGAACGATGAAGCCAAAGTTGTTATAAATGATCTAACGGATGAAGAGGAGGAGGAGGAGGAAGAGTGTGGTGGTTGTAGGGTTGATTATGATGAAGACGAAGAGGAAGACAACGAAGAAGAAAATGAAGAGGTTTTGTTCGATAGAGACTCGTTTTCGAGAATGCTTCGGAGGGTGTCATTGCCCGAAGCTAGATTATATGCACGCATATCCCACCTGGGCAATTTGGCATATTCTATCCCAAAAATCAAACCTGGGATCCTCCTCAAAAACCATGGACTGCGTTTTGTAACTTCATCCATAGAGAAAAAGAAATTAGCTGTGGCAGCCGAAAAAAACCAGACATCAGCTGCAATTCCGAAAGAAGAAGCTAACGAGAAGGATGTGGGAGAAACAAAAGAGAAAAAGAACGGTGGACGCATGATTTGTGCATGTACTGCATACGAGATTGCTGCTTCTGCAGCCTCTTATCTCCGTACTCAAACAAAGAGCATACTTCCATTCACATCTTCCAATGCTGTGGAAGGTGAAGGTTCACATGAAGCAAGCAATAAAAGCTTTAACGGAGATAAGATGACAAAAACAGAGGAGGCCGCTCTGAAGGCAACTACTGATTCGGTAACAGCAGTTGTTGCTGCAAATGAGGATGTAAAACAGGCATTTGCAGATCATTTGAGCTCGACAACCTCTTCACCCTGTGAATGGTTCGTATGCGACGATGACAAGACTGCTACAAGATATTTTGTGATCCAGGGTTCCGAGACATTTGCTTCCTGGAAAGCGAACCTACTATTTGAGCCAGTTAAATTTGAGGGGTTAGATGTTCATGTACATAGAGGGATATATGAGGCTGCAAAGGGAACTTATCAACAGATGTTGCCAGAAATTCGTGCACACCTAAAATCTCATGATTCCCGTGCAACTTGCCGTTTCACTGGTCATTCTCTTGGGGGAAGCTTGGCATTACTTGTAAACCTTATGCTGTTAATAAGAAAGGAAGCACCATTGTCTTCTCTGCTTCCTGTCATAACATTTGGCGCCCCATCCATCATGTGTGGAGGTGATAGTCTTCTTGACAAGTTAGGATTGCCACGGAGTCATGTTCAAGCAATCACAATGCACAGAGACATAGTACCACGAGCATTTTCTTGCAAGTACCCTACCCATATTGCTGAACTGCTAAAGGCCGTTAATGGTAACTTCCGCAGTCATCCATGCCTTAATAACCAGAAGCTACTGTATGCACCAATGGGTGAACTCTTGATCCTACAGCCAGATGAGAAATTTTCACCAAGTCATCATCTTCTGCCCTCGGGCAGTGGTCTATATCTTTTGAGTGGTCACTTGTCAGAATCAAGTGACACATTAAAACAGATCCGGGCAGCACAGATGGTGTTCTTGAACTCACCACACCCACTTGAGATATTAAGTGACCGATCTGCCTATGGATCCGGAGGAACCATTCAGAGGGATCACGACATGAATTCCTACTTGAAATGTGTGAGAACCGTGATTCGCCAAGAACTTAGCCAGATTCGCAAGGCAAGGAGAGAGCAAAGGCTAAAGGTGTGGTGGCCTCTGGTGCTCCCATGTGGAAGTGGGAGTGGGGCAGTTGTTGGGGGGTCCATGATATCGGTGAATGTGATTCACGACCATCTTTCTTTCTTTGGCATCATCCACACTGGGAGTGAGTCATTGAAAAGGTTCAGTAGGCTTGTTGCATCGCAGCACATGCAATGGTTTGTAGTGCTTCTGTTTCCTGCACGGTTGTTACTGGTTGGATGTAACTTGATTAGCTTAAGATGA 2127 0.4542 MDALCLHSSICKIAPSTIPITATARANDYASQSQVSTVGRSLFSRFSFRYPLTSLWPQQLTGNASGYNGLAVDDAVLAENETKEGEGQNGNSVFKIFHARSVWSVEQRNDEAKVVINDLTDEEEEEEEECGGCRVDYDEDEEEDNEEENEEVLFDRDSFSRMLRRVSLPEARLYARISHLGNLAYSIPKIKPGILLKNHGLRFVTSSIEKKKLAVAAEKNQTSAAIPKEEANEKDVGETKEKKNGGRMICACTAYEIAASAASYLRTQTKSILPFTSSNAVEGEGSHEASNKSFNGDKMTKTEEAALKATTDSVTAVVAANEDVKQAFADHLSSTTSSPCEWFVCDDDKTATRYFVIQGSETFASWKANLLFEPVKFEGLDVHVHRGIYEAAKGTYQQMLPEIRAHLKSHDSRATCRFTGHSLGGSLALLVNLMLLIRKEAPLSSLLPVITFGAPSIMCGGDSLLDKLGLPRSHVQAITMHRDIVPRAFSCKYPTHIAELLKAVNGNFRSHPCLNNQKLLYAPMGELLILQPDEKFSPSHHLLPSGSGLYLLSGHLSESSDTLKQIRAAQMVFLNSPHPLEILSDRSAYGSGGTIQRDHDMNSYLKCVRTVIRQELSQIRKARREQRLKVWWPLVLPCGSGSGAVVGGSMISVNVIHDHLSFFGIIHTGSESLKRFSRLVASQHMQWFVVLLFPARLLLVGCNLISLR* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2193 708 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 26 702 - -
Pvu1g2193 708 Gene3D alpha/beta hydrolase 294 519 IPR029058 -
Pvu1g2193 708 SUPERFAMILY alpha/beta-Hydrolases 336 521 IPR029058 -
Pvu1g2193 708 CDD Lipase_3 309 487 - -
Pvu1g2193 708 Pfam Lipase (class 3) 355 491 IPR002921 GO:0006629
Pvu1g2193 708 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 26 702 IPR043367 GO:0008970
Pvu1g2193 708 Coils Coil 109 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2193 Pvu-Chr1 47537471 47540584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2193 1 708 Acyl Lipid Metabolism Gene Families AT1G02660 54.274 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2193 - - gmx:100788786 1002.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2193 1 47537471 47540584 Pvu1g2193 1 47537471 47540584 ECH
Pvu1g2193 1 47537471 47540584 Pvu7g2217 7 45459652 45463100 PCT