Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu1g2189 | ATGCAGAGTCACGGGTCGGGTCATGGGCCGGGTCACCAGACTTACGGTGGTGACAGGAGGATAGAGGTTGTGAGCGGTAGAAGCCACGGTTGGAGTGGTAGTCGGTCGCCAAATTCTACTCAGGTGAGTGAAAAGCCTTGGAGATTCAGCGATCCAGAAGCGAAGAGGAAGAAAAGGATAGCGAAATACAAGGTTTACGGCGTGGAAGGGAAGGTTAAGGCTACGCTCAAAGAAGGACTACGATGGATCAAGAAAAAGTGCTCTCAGATCGCCCATGGCTACTAA | 285 | 0.5158 | MQSHGSGHGPGHQTYGGDRRIEVVSGRSHGWSGSRSPNSTQVSEKPWRFSDPEAKRKKRIAKYKVYGVEGKVKATLKEGLRWIKKKCSQIAHGY* | 95 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu1g2189 | 94 | MobiDBLite | consensus disorder prediction | 1 | 54 | - | - | |
| Pvu1g2189 | 94 | PANTHER | DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATED | 1 | 94 | - | - | |
| Pvu1g2189 | 94 | Pfam | Domain of unknown function (DUF3511) | 49 | 93 | IPR021899 | - | |
| Pvu1g2189 | 94 | MobiDBLite | consensus disorder prediction | 29 | 46 | - | - | |
| Pvu1g2189 | 94 | PANTHER | DUF3511 DOMAIN PROTEIN | 1 | 94 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pvu1g2189 | Pvu-Chr1 | 47499736 | 47500629 | Dispersed/Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pvu1g2189 | - | - | pvu:PHAVU_001G211500g | 181.8 |