Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2185 ATGTTTCGGATTACGAGATTCTCGGGTTTTTTCTCCGCCGCAATGTTTGTCATTGTTCTTATCGTTCTCTCCCCCTCCTTCCAATCCGAAGCAATTCGATCCTCCCACCGATTTTCCTTCCGGAAAGCCCCTCCCTTCCGTAATGCCCACGAATGCGCCTGGGTTCCCGACGAAACAAAAGGGTGCGACCCTTCTTTAGTCCACGTCGCAATAACTCTCGACGTCGAATATCTCCGCGGTTCAATCGCCGCCGTGCACTCCATCCTCCGCCATTCCCTCTGTCCGGAGAACGTCTTCTTCCATTTCCTCGTCTCCGACACGAATCTTCAAACCCTAGTGGAGTCCACCTTCCCGCACTTGAAATTCAACGTCTATTACTTCGATCCTAACACCGTCTCCCACTTGATCTCCTCCTCCGTGCGCCAGGCGCTGGAGCAGCCTCTCAATTACGCCAGGAACTACCTCGCCGAACTTCTCGAGAGTTGCGTGGAGCGAGTTATCTACCTGGACTCCGATCTTGTGGTGGTGGACGACGTGGCCAAGCTCTGGAGCGCGAGTCTGGGCTCACGCGCCATCGGCGCGCCGGAGTACTGCCACGCGAACTTCACGAAGTACTTCACGGCGGCGTTCTGGTCGGAGCCGAGTTTATCGGGGACGTTCGCGCAGCGGAGGGCGTGTTACTTCAACACGGGGGTGATGGTCATGGATCTGGTGAAGTGGAGGAAGGAGGGGTACACGAGAAGAATCGAGAGGTGGATGGAGATTCAGAAGAGTGATCGGATCTACGAGCTGGGTTCGCTGCCGCCGTTTTTGCTGGTGTTCGCGGGACACGTGGCGCCCATTGAGCACCGATGGAACCAGCACGGTTTGGGCGGGGATAACGTGAAGGGTAGTTGCCGTGGGTTGCACCCTGGTCCGGTTAGTTTGTTGCATTGGTCCGGTAGTGGAAAACCCTGGCTCCGTTTACACTCCAAACGTCCTTGCCCTCTCGATTCTCTGTGGGCTCCCTTTGACTTGTACGCACACTCTCCCTCTTAA 1038 0.5617 MFRITRFSGFFSAAMFVIVLIVLSPSFQSEAIRSSHRFSFRKAPPFRNAHECAWVPDETKGCDPSLVHVAITLDVEYLRGSIAAVHSILRHSLCPENVFFHFLVSDTNLQTLVESTFPHLKFNVYYFDPNTVSHLISSSVRQALEQPLNYARNYLAELLESCVERVIYLDSDLVVVDDVAKLWSASLGSRAIGAPEYCHANFTKYFTAAFWSEPSLSGTFAQRRACYFNTGVMVMDLVKWRKEGYTRRIERWMEIQKSDRIYELGSLPPFLLVFAGHVAPIEHRWNQHGLGGDNVKGSCRGLHPGPVSLLHWSGSGKPWLRLHSKRPCPLDSLWAPFDLYAHSPS* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2185 345 SUPERFAMILY Nucleotide-diphospho-sugar transferases 67 341 IPR029044 -
Pvu1g2185 345 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 6 343 - -
Pvu1g2185 345 Pfam Glycosyl transferase family 8 68 321 IPR002495 GO:0016757
Pvu1g2185 345 PANTHER GALACTURONOSYLTRANSFERASE-LIKE 6-RELATED 6 343 - -
Pvu1g2185 345 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 68 328 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2185 Pvu-Chr1 47476492 47477529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2185 1 342 Glycosyltransferase AT3G62660 73.684 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2185 - - gmx:100805221 651.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2185 1 47476492 47477529 Pvu1g2185 1 47476492 47477529 ECH
Pvu1g2185 1 47476492 47477529 Pvu7g2232 7 45580701 45581962 PCT