Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2184 ATGGTCAAAACGGCGTCGTCCCCTTCTTCCTCTCCGGTCACCATTACGGTGTCGTCCGGAGGACGACGCAGAAGCATGGGACTAACCAGTCCCGTTCCTCGCGCCTCAGTCTCCACCAACAACCCAACTTCTCCTCTCAGAGCTTCCGGCGGAGGTAGGAGACTCTCTGGCGCCGGCGCTTCCAAAGGCGGTGGCATCGAAGAAATGAACTCTGAGTACGTGTCGTACACCGTTCACATTCCCCCGACGCCGGACCGCAAGCCCCTGACAATCTCGGAAGACGGAAAAGGAAGCACGAGTTTCATCTCCGGCACGATCTTCACCGGAGGCTACAACTCCGTGACGCGTGGCCACTCCTCCGTGGAAATCGAAGCGCTGCCGAAATCGACGTCGGTTTGCGGAAATAAGGGTTGCGACGAGGAAGCAATGAAAGGCTTGTGTAATCCGTGCGAGTGCGGGTTCAAGATCTGCAGGGAGTGTTACTTTGAGTCTGGTGGGAACAATGGTGGAGGAAAGTGTCCTGGGTGCAAACTGCTTTATAAGTATGCGAGTGATGATGAAGATAATGAAGAGGGAGAGGGGTCTGAGGGTGATGATCAGCCTCTGCCTCTGCCTTCCATGGCGGAGGTCAAGTTGGACAAGAGGTTTTCTCTTGTGAAGTCCTTCAAAGCGCAGAATCATCCTCAGGAATTTGACCACACGCGATGGCTGTTTGAGACGAAGGGGACATATGGCTATGGAAACGCTGTGTGGCCTAAAGATGGTTACGGTGCTAACGGGTTTGGACCCCCACCGGATTTTGGAAAGAAAGCGAAGAGACCCTTGACCCGCAAGGTTGGAGTTTCAGCTGCTATTCTCAGCCCTTATAGGATGCTTATTCTGCTGCGTCTTGTTGCTTTGGGTTTATTTCTTACATGGAGGATAAGACACCCAAACCATGAAGCGATTTGGCTGTGGGCAATGTCTATAACTTGTGAGCTATGGTTTGCATTTTCTTGGCTTCTTGATCAGCTTCCTAAGCTGTGTCCCGTGAACAGAGTCACTGATCTATCTGTTCTGAAAGAGCAGTTTGAGTCTCCAAACCTGCGCAACCCAAAAGGGAGATCTGATCTACCAGGAATTGATGTGTTTGTTTCCACGGCAGACCCTGAAAAGGAGCCTCCTCTTGTGACCGCCAACACCATTCTCTCCATCCTTGCAGTTGATTATCCAGTGGAGAAGGTTGCCTGTTACTTGTCTGATGATGGTGGAGCTTTGTTGACATTTGAAGCTCTTGCTGAGACTGCTAGTTTTGCTAGAATTTGGGTTCCTTTCTGTCGTAAGCACCATATAGAACCCCGAAATCCTGAAGCTTATTTTGGGCAGAAACGTGATTTCCTCAAGAACAAGGTCCGGTTGGACTTTGTGAGAGAGAGGAAAAGGGTGAAGAGGGAATATGATGAGTTCAAAGTGAGGATAAACTCCTTGCCGGAGTCCATTAGGAGAAGATCCAATGCTTACAATGCTCATGAGGAGCTACGAGTCAAGAAGAAACAGATGGAAACAGATGCCAATGTCTCCGAACCCGTTAAGGTTCCTAAAGCTACGTGGATGTCCGATGGCTCTCATTGGCCAGGAACTTGGGCATCAGCGGAACAAGACCACTCGAGGGGGGACCATGCTGGCATAATTCAGGCAATGTTAGCTCCACCAAATGCAGAACCGGAATTTGGTGCAGGAGATGATGGAGATAACTTGATTGATGCAACAGATGTTGATATTAGGTTGCCCATGCTTGTTTACGTGTCTCGTGAAAAGAGGCCAGCATATGACCACAACAAGAAAGCAGGGGCAATGAATGCTCTTGTTCGCACCAGTGCCATCATGTCCAATGGGCCATTCATTCTGAATCTTGATTGTGATCATTACATCTACAACTCCTTGGCTCTAAGAGAAGGTATGTGCTTTATGCTTGATAGGGGTGGTGATAGGATATGCTACGTTCAGTTTCCTCAAAGGTTTGAGGGCATTGACCCCAGTGACAGATATGCAAATCACAACACTGTGTTCTTTGATGTGAGCATGAGAGCTCTGGATGGCTTACAAGGTCCCATGTACGTGGGAACAGGCTGCATATTCAGAAGAACAGCTCTGTATGGATTTAGTCCTCCTAGAGCCACAGAACATCATGGGTGGCTTGGCAGGAAGAAAATTAAGCTGTTTCTGAGAAAACCAAAGGTCTCAAAAAAGGAAGAGGATGAAGTTTCTGTGCCAATAAATTTTGATCATAATGATGATGATGCAGACATAGAGTCCTTGCTTCTTCCCAAAAGATTTGGGAATTCTACTTCTCTTGCTGCGTCCATTCCTGTGGCGGAATACCAGGGAAGGTTGCTTCAAGATTTGCAAGGAAAGGGAACACATGGAAGGCCAGTAGGTTCTCTTGCTGTGCCTCGTGAGCCATTGGATGCGGCCACTGTTGCTGAGGCAATAACTGTAATATCTTGTTTCTATGAAGATAAAACTGAATGGGGCAAACGAGTGGGATGGATATATGGTTCAGTCACAGAAGATGTGGTAACTGGTTACAGAATGCACAATAGAGGGTGGAGATCAGTGTACTGTGTAACCAAAAGGGATGCTTTTAGAGGATCAGCTCCAATCAATTTAACAGACAGGCTCCATCAAGTGCTTCGATGGGCTACAGGTTCCGTTGAAATCTTCTTTTCAGCTAACAATGCGTTATTAGCTAGTCCTAGAATGAAGTTCCTGCAGAGAGTGGCATACTTAAATGTAGGAATGTACCCTTTCACCTCAATGTTTTTGATAGTCTATTGCTTTCTACCTGCGTTGTCTCTATTTTCGGGTCAGTTTATAGTCCAATCTCTCAGTGTAACTTTTTTAGTATTCTTGCTGGGTATCACAATCACACTGTGTTTGCTTGCACTGCTGGAGATCAAATGGTCAGGAATCACTCTACATGATTGGTGGAGAAATGAACAGTTCTGGCTAATTGGTGGAACAAGTGCACACGCTGCTGCTGTTTTACAAGGGTTACTGAAGGTAATAGCAGGAGTGGAGATATCATTCACTTTAACTTCGAAGTCAGCCACTCCAGAAAATGAAGAGGATGAGTTTGCTGACCTCTATGAGGTGAAGTGGAGCTTTCTAATGATCCCTCCCATTACTATTATGATGGTGAACGCCATTGGTATTGCTGTAGGAGTAGCTAGGACCGTGTACAGTCCCTTTCCACAATGGAGCAGACTAGTAGGAGGGGTGTTTTTCAGTTTCTGGGTCTTGTGCCATCTTTATCCTTTTGCAAAGGGCCTCATGGGAAGAAGAGGAAAGATTCCTACCATCATTTATGTCTGGTCTGGATTGCTCTCCATTATTATTTCTTTGCTCTGGGTATACATAAACCCTCCTTCAGGAAGAACAGAAGATTATATGAATTTCAAATTTCCTTGA 3450 0.4672 MVKTASSPSSSPVTITVSSGGRRRSMGLTSPVPRASVSTNNPTSPLRASGGGRRLSGAGASKGGGIEEMNSEYVSYTVHIPPTPDRKPLTISEDGKGSTSFISGTIFTGGYNSVTRGHSSVEIEALPKSTSVCGNKGCDEEAMKGLCNPCECGFKICRECYFESGGNNGGGKCPGCKLLYKYASDDEDNEEGEGSEGDDQPLPLPSMAEVKLDKRFSLVKSFKAQNHPQEFDHTRWLFETKGTYGYGNAVWPKDGYGANGFGPPPDFGKKAKRPLTRKVGVSAAILSPYRMLILLRLVALGLFLTWRIRHPNHEAIWLWAMSITCELWFAFSWLLDQLPKLCPVNRVTDLSVLKEQFESPNLRNPKGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAVDYPVEKVACYLSDDGGALLTFEALAETASFARIWVPFCRKHHIEPRNPEAYFGQKRDFLKNKVRLDFVRERKRVKREYDEFKVRINSLPESIRRRSNAYNAHEELRVKKKQMETDANVSEPVKVPKATWMSDGSHWPGTWASAEQDHSRGDHAGIIQAMLAPPNAEPEFGAGDDGDNLIDATDVDIRLPMLVYVSREKRPAYDHNKKAGAMNALVRTSAIMSNGPFILNLDCDHYIYNSLALREGMCFMLDRGGDRICYVQFPQRFEGIDPSDRYANHNTVFFDVSMRALDGLQGPMYVGTGCIFRRTALYGFSPPRATEHHGWLGRKKIKLFLRKPKVSKKEEDEVSVPINFDHNDDDADIESLLLPKRFGNSTSLAASIPVAEYQGRLLQDLQGKGTHGRPVGSLAVPREPLDAATVAEAITVISCFYEDKTEWGKRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGSAPINLTDRLHQVLRWATGSVEIFFSANNALLASPRMKFLQRVAYLNVGMYPFTSMFLIVYCFLPALSLFSGQFIVQSLSVTFLVFLLGITITLCLLALLEIKWSGITLHDWWRNEQFWLIGGTSAHAAAVLQGLLKVIAGVEISFTLTSKSATPENEEDEFADLYEVKWSFLMIPPITIMMVNAIGIAVGVARTVYSPFPQWSRLVGGVFFSFWVLCHLYPFAKGLMGRRGKIPTIIYVWSGLLSIIISLLWVYINPPSGRTEDYMNFKFP* 1150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2184 1149 SUPERFAMILY Nucleotide-diphospho-sugar transferases 389 941 IPR029044 -
Pvu1g2184 1149 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 89 1143 - -
Pvu1g2184 1149 MobiDBLite consensus disorder prediction 1 47 - -
Pvu1g2184 1149 Pfam RING/Ubox like zinc-binding domain 147 181 - -
Pvu1g2184 1149 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN D3 89 1143 - -
Pvu1g2184 1149 MobiDBLite consensus disorder prediction 1 66 - -
Pvu1g2184 1149 Pfam Cellulose synthase 374 1141 IPR005150 GO:0016020|GO:0016760|GO:0030244
Pvu1g2184 1149 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 573 723 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2184 Pvu-Chr1 47468476 47472938 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2184 34 1149 Glycosyltransferase AT3G03050 65.655 0.0 1516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2184 K00770 - gmx:100797597 2085.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2184 1 47468476 47472938 Pvu1g2184 1 47468476 47472938 ECH