Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2182 ATGGAAGACGAGAATTTCAGTTTTGGCCGCTCTACTGCCTCCAGAAGCTACCAATCCAGGCTCAAGTCACACTTCGAGCTTTTCGTCGATTTTGATGAGGTCAATGGGGATGAGGATTTTAGGTGGGCTTATCCATGCCCTTTTTGCGCTGAAGATTTTGATCTTCTTGAACTATGTTGTCATATTGACTTGGACCATTCAACAGAAGCCAAGTCTGGGATTTGTCCTGTATGTACCGTGTGGATTGGGTCAAATGTCGTTGATCATATAGCAGCACAACATGGGAACTTGTTTAAGAGTCAGCTGAAATCAAAATGCTACAAAGATGAATCCTACCCAGATCTTTCCTTTTCAAGAAAGGGTGAACCAGATGAACACTGGCAATCTTTTTCTGCTGGGATGTCTACCTCCAACACATCAAGTGATCCATGGCTGTCATTTTTATGTGGTGCATCTGCTGTTGATGAATGTGAAAATGTGCTGCCAGATTCTTCAAGTGAAATAAGCGTTGAAGAAGTGCACTCAAATGATAAAGTGTTAGAAAGGGATGTTCAGCCACATTTATCTGACAAAGACCAAATAGAGAAAGCACAGCGCAGTAAATTTGTACAGGGACTTTTGATGTCTACTATCTTTGATTCTGGCTTCTGA 651 0.4178 MEDENFSFGRSTASRSYQSRLKSHFELFVDFDEVNGDEDFRWAYPCPFCAEDFDLLELCCHIDLDHSTEAKSGICPVCTVWIGSNVVDHIAAQHGNLFKSQLKSKCYKDESYPDLSFSRKGEPDEHWQSFSAGMSTSNTSSDPWLSFLCGASAVDECENVLPDSSSEISVEEVHSNDKVLERDVQPHLSDKDQIEKAQRSKFVQGLLMSTIFDSGF* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2182 216 Pfam Drought induced 19 protein (Di19), zinc-binding 44 95 IPR008598 -
Pvu1g2182 216 PANTHER PROTEIN DEHYDRATION-INDUCED 19 1 215 IPR033347 -
Pvu1g2182 216 Pfam Stress-induced protein Di19, C-terminal 115 211 IPR027935 -
Pvu1g2182 216 PANTHER DROUGHT-INDUCED PROTEIN 1 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2182 Pvu-Chr1 47445931 47449560 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2182 - - gmx:100527153 369.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2182 1 47445931 47449560 Pvu7g2054 7 43935899 43938621 ECH
Pvu1g2182 1 47445931 47449560 Pvu1g2182 1 47445931 47449560 ECH
Pvu7g2054 7 43935899 43938621 Pvu1g2182 1 47445931 47449560 ECH