Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2181 ATGGCTTTAGGAAACGGCACTGAACGCCTAAGAACAATTTGGACACCCGAGATGGATCGTTATTTCATCGATCTTATGTTAGAGCAGGTTAGTCAGGGCCGGGAAGTTGAGGATCATTTGTTTAGCAAAAGGGCGTGGAGGCATATGTCTTCAAAGTTCAATGCTAAGTTCAATTTTCAGTACGAAAAAGATGTTCTTAAGAACCGCCACAAAACGTTAAGGAATCTTTACAGGAGTATTAAGAACCTTCTTGGCCAACCAGGGTTTAGCTTGGACGAAAAGCGAAATATGGTCATTGCTGATGATCAGGTAGATGTGAATGCGCTATCATGTAGAGTAAAAAAAAGCTTACCCAATTTCAAAGATTTGTGCACTATTTATGGACATGTGATGGAAGGGAAAGGTGATGCTGCATTAGAAGAGTTATCTAATTCAGGCGAAAGGGGAGCAATTGTTCCTTATGTATCAAAGGATGTATGTGAGGATGCTGATGAACTTCTTCGTGATGTTAGGGCTGATGAAGACTGTGGAATCTCTACCTTGGATAAAGCAACTGATGATTGTGAACAAAGAATATCGAAGGAAACAACACCCTCTTTTGGTACCCGGACCCGGACTTATTGGCAGCCACCGATGGATCGTTACTTCATTAACTTGTTGCTTGCTCATGTGCGAAAAGGGAATCAGTTTGATGGTGTCTTCAGCAAACAAGCTTGGATGGAGATAATTTCATCATTCAATGAAAAATTTGGTTTTGAGTATAGTTTGGAGATTCTTAAGAATAGGTACAAAACTCTGAGAAGGCAATACAATTTAATTAAAAGCCTCCTTCAGTTGGATGGCTTTGCCTGGGATGAAATACGCCAGATGGTTATTGCCGATGATTATGTCTGGCAAGATTATATTAAGGTTCATCCTTATGCACGACAATATATGACTCGACCTTTGCCATACTATAAAGATTTGCGTGTCATATGTGATCCAAGTTTTGATGAAAAAGAATATTTTCTGCCTCCAGATAAGCATCAAAATGCAGTTGATTTTAGGATCGAGTGTCTTTCAACATCTAAAACTGGTCAGTCTCCATTTACACCCAGTTCCAATGAAGAACAATTTAGCGGTGTCAATGAGTTAGCTTATATAGGTCAGAAACAGAAGCGCCAATTAGAGAACTCTTCTAGTTCTACCAGTCCTAAAAAATCAAGGAATGATGAACAAGGCATGGCTGCTGCACTCCATGAGATGGCAGCTGTAGTTTCAACGGTGTCTGCAAAAAAGGATGATACCTCAATATCAATAGAGAATGTCATAGAAGCAGTGCAAGCATTGCCTGATATGGATGACGATCTGGTTTTGGATGCTTGTGATTTTTTGGAGGATGAAAGAAAAGCTAAAACATTTCTTGCATTGGATGCCAAGCTTAGGAAAAAATGGTTGATTAGGAAACTTTGCACATAG 1458 0.3964 MALGNGTERLRTIWTPEMDRYFIDLMLEQVSQGREVEDHLFSKRAWRHMSSKFNAKFNFQYEKDVLKNRHKTLRNLYRSIKNLLGQPGFSLDEKRNMVIADDQVDVNALSCRVKKSLPNFKDLCTIYGHVMEGKGDAALEELSNSGERGAIVPYVSKDVCEDADELLRDVRADEDCGISTLDKATDDCEQRISKETTPSFGTRTRTYWQPPMDRYFINLLLAHVRKGNQFDGVFSKQAWMEIISSFNEKFGFEYSLEILKNRYKTLRRQYNLIKSLLQLDGFAWDEIRQMVIADDYVWQDYIKVHPYARQYMTRPLPYYKDLRVICDPSFDEKEYFLPPDKHQNAVDFRIECLSTSKTGQSPFTPSSNEEQFSGVNELAYIGQKQKRQLENSSSSTSPKKSRNDEQGMAAALHEMAAVVSTVSAKKDDTSISIENVIEAVQALPDMDDDLVLDACDFLEDERKAKTFLALDAKLRKKWLIRKLCT* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2181 485 Coils Coil 256 276 - -
Pvu1g2181 485 MobiDBLite consensus disorder prediction 384 407 - -
Pvu1g2181 485 PANTHER EXPRESSED PROTEIN 180 343 - -
Pvu1g2181 485 PANTHER EXPRESSED PROTEIN 6 145 - -
Pvu1g2181 485 PANTHER EXPRESSED PROTEIN 375 483 - -
Pvu1g2181 485 MobiDBLite consensus disorder prediction 385 403 - -
Pvu1g2181 485 Pfam Myb/SANT-like DNA-binding domain 14 104 IPR024752 -
Pvu1g2181 485 Pfam Myb/SANT-like DNA-binding domain 207 301 IPR024752 -
Pvu1g2181 485 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 6 145 - -
Pvu1g2181 485 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 180 343 - -
Pvu1g2181 485 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 375 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2181 Pvu-Chr1 47440749 47444834 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2181 - - gmx:100787716 776.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2181 1 47440749 47444834 Pvu1g2181 1 47440749 47444834 ECH