Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2172 ATGGGTTATATCGGGTCTCACGGTGTTGCAGCTCTTCACAGATATAAATACAGTGGAGTAGATCATTCCTACGTGGCCAAATATGTACTGCAACCCTTTTGGACCCGCTTTGTTAATTTTTTCCCCCTATGGATGCCTCCAAATATGATAACTCTCATGGGATTTATGTTCTTAGTAGTGTCTGCATTGATTGGTTATATATACTCCCCACATTTGGACTCAGCTCCTCCAAGATGGGTTCATTTTGCTCATGGACTACTTCTGTTTTTATACCAGACATTTGATGCGGTTGATGGGAAGCAAGCTAGACGTACAAATTCTTCAAGCCCATTGGGGGAGCTCTTTGATCATGGGTGTGATGCACTTGCTTGTACATTTGAAGCATTGGCTTTTGGGAGCACAGCCATGTGTGGAAGAGGTACATTCTGGTGGTGGTTAATATCTGCAATTACATTTTATGGTGCAACCTGGGAGCACTATTTCACCAATACTCTTATACTGCCTGTTATAAATGGGCCCACGGAGGGTCTTATGATAATATACATCTGTCACTTTTTCACTGCTATCGTGGGTGCTGAGTGGTGGGCTCAACCATTTGGAAAGTCTTTGCCATTTTTAAGTTGGCTTCCTTATCTTGAGGGAATCGCAACATTCAAAGCTATATTGTGTTTGATGATAGCTTTTGGTGTTACACCGACAGTTACATGCAATGTTACTAATGTTTATAAGGTTGTGAAGGCAAGGAATGGAAACATGCCACTTGCATTGGCAATGCTTTACCCATTTGTTGTACTTGTGGGAGGAGTGCTTATGTGGGATTATTTGTCACCATCAGACATCATGGGGAGATATCCACATTTAGTTGTTATTGGGACAGGACTTACTTTCGGATACCTTGTGGGGAGGATGATTTTGGCTCATTTATGTGACGAACCTAAGGGTCTAAAAACTGGGATGTGCATGTCCCTCGTGTATCTCCCATTGGCCATTGCTAATGTACTTGCATCAAGGCTGAATGATGGGGTTCCTTTATTAGATGAGAGACTAGTTCTTCTTGGTTACTGTGCATTTTCAGTGACACTTTACTTGCACTTTGCCACATCAGTCATTCATGAAATTACCAAAGCCCTGGGAATATACTGTTTCAGGATAACTAGGAAGGAAGCTTAA 1170 0.4197 MGYIGSHGVAALHRYKYSGVDHSYVAKYVLQPFWTRFVNFFPLWMPPNMITLMGFMFLVVSALIGYIYSPHLDSAPPRWVHFAHGLLLFLYQTFDAVDGKQARRTNSSSPLGELFDHGCDALACTFEALAFGSTAMCGRGTFWWWLISAITFYGATWEHYFTNTLILPVINGPTEGLMIIYICHFFTAIVGAEWWAQPFGKSLPFLSWLPYLEGIATFKAILCLMIAFGVTPTVTCNVTNVYKVVKARNGNMPLALAMLYPFVVLVGGVLMWDYLSPSDIMGRYPHLVVIGTGLTFGYLVGRMILAHLCDEPKGLKTGMCMSLVYLPLAIANVLASRLNDGVPLLDERLVLLGYCAFSVTLYLHFATSVIHEITKALGIYCFRITRKEA* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2172 389 Gene3D - 22 239 IPR043130 -
Pvu1g2172 389 PIRSF CHOPT 1 389 IPR014472 -
Pvu1g2172 389 PANTHER CHOLINE/ETHANOLAMINEPHOSPHOTRANSFERASE 2 1 386 - -
Pvu1g2172 389 Pfam CDP-alcohol phosphatidyltransferase 46 153 IPR000462 GO:0008654|GO:0016020|GO:0016780
Pvu1g2172 389 PANTHER ETHANOLAMINEPHOSPHOTRANSFERASE 1 386 IPR014472 -
Pvu1g2172 389 ProSitePatterns CDP-alcohol phosphatidyltransferases signature. 98 120 IPR000462 GO:0008654|GO:0016020|GO:0016780
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2172 Pvu-Chr1 47349491 47358784 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2172 49 389 Miscellaneous Gene Families AT1G13560 80.352 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2172 K00993 - gmx:100782910 770