Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2170 ATGGCTAAGCAACCATCAAAACCAACACTTGGTCGGCTTCCCAGTATCAGAGACCGAGTTCAAGACACTCTCTCAGCTCATCGTAACGAACTCATTTCTCTCCTCTCCAGGTATGTGGCTCAGGGGAAAGGGATTTTGCAACCTCATAACTTAATTGATGAACTTGACAACATCCCTGGTGACGAGCAAGCAAAGTTGGACCTTAAAAATGGCCCATTCGGTGAGATTGTCAGGGCTGCACAGGAAGCCATAGTTTTGCCTCCTTTTGTGGCAATAGGAGTTCGTCCAAGACCTGGTGTTTGGGAATATGTCCGTGTTAATGTCTCTGAACTCAGCGTGGAGCAATTAAGCGTTTCTGAATATCTCAGCTTTAAGGAAGAACTCGTGGATGGGAAGAGTAATGACAATTTTGTACTGGAACTTGATTTTGAGCCATTTAATGCCTCATTTCCTCGTCCATCCCGTTCATCATCTATTGGCAATGGTGTCCAATTTCTCAATCGCCACCTTTCATCAAATATGTTCCGCAACAAAGATTCCTTGGAACCCTTGCTTGATTTCCTCCGAGCTCACAAATATAAGGGCCACGCTCTGATGTTAAATGATAGAATACATAACATTTCCAAACTTCAGGCTGCTCTGGCCAAGACTGAGGATTATCTTTCTAAGATTCCACGTGATACACCCTATTCAGAGTTTGAATATGTGTTACAAGGAATGGGTTTTGAGAGAGGTTGGGGTGATACTGCTCAAAGGGTATTGGAAACGATGCATCTGCTACTGGATATTCTTCAGGCTCCTGATCCTTCTACACTAGAGACTTTTCTTGGCAGAGTGCCAATGGTATTCAATGTTGTTATATTATCTCCTCATGGCTTCTTCGGACAAGCCAATGTCTTGGGTTTGCCAGACACTGGTGGGCAGGTTGTTTATATACTAGATCAAGTGCGTGCCCTTGAGAATGAGATGCTCCTTCGGATTAAGAAACAAGGACTAGATTTCACTCCTAGAATTCTAATTGTTACCAGGCTAATACCTGATGCAAAGGGGACAACTTGCAATCAACGACTAGAAAGAGTCAGTGGTACTGACCACACTCATATTTTGCGAGTTCCATTCAGATCAGAGTCAGGAACTCTCCGTAAATGGATTTCAAGGTTTGATGTGTGGCCTTATCTAGAGACTTATGCAGAGGATGTTGCCAGTGAAATTGCTGCTGAGTTACAAGGTTATCCTGACTTCATCATTGGAAACTACAGTGATGGGAATCTTGTTGCGTCTTTACTGGCTTATAAGATGGGAGTTACACAGTGCACCATCGCGCATGCACTTGAGAAGACAAAATATCCGGATTCAGATTTATATTGGAAGAAATTTGATGATAAATATCACTTTTCATGCCAGTTCACTGCTGATCTAATAGCCATGAATAATGCTGATTTTATCATCACCAGTACTTACCAAGAGATTGCAGGAACGAAAAATACCGTTGGACAGTATGAGAGCCACACTGGTTTTACTCTTCCTGGGTTGTATAGGGTTGTCCATGGCATTGATGTTTTTGATCCCAAGTTCAATATTGTTTCTCCTGGAGCAGATATGTCAATGTATTTCCCCTACTCTGAAAAGCAGAAGAGGCTTACATCCCTACATGGTTCAATTGAACAGCTATTGTATGATACAGCACAGAGTGATGAATACACTGGATCACTGAATGACAAGTCAAAGCCCATAATTTTCTCCATGGCAAGGCTAGACAGAGTGAAGAACATAACAGGATTGGTTGAATGCTTTGCTAAGAACAGCAAATTGAGGGAACTGGTCAACCTTGTTATAGTAGCTGGTTACATTGATGTAAAGAAGTCCAGCGACAGAGAAGAAATTGCAGAAATTGAGAAGATGCATGGCCTCATGAAAGAGTACAAATTAAATGGTGATTTTCGTTGGATTGCTGCCCAGACAAATAGGGCACGTAACGGGGAGCTGTATCGCTACATAGCAGACACACAAGGTGCTTTCGTTCAGCCTGCTTTCTATGAAGCTTTTGGGCTTACAGTTGTGGAGGCCATGACCTGTGGACTCCCCACATTTGCTACTTCCAATGGTGGTCCTGCTGAGATCATTGAGCATGGTATATCAGGATTTCACATTGATCCTTATCACCCTGAACAAGCTTCAGAGCTATTGGTTGAATTCTTCCAGAAATGCAAGAAGGACCCAAGCCATTGGAAGAAAATATCTGAAGCTGGTCTTCAAAGAATTTATGAAAGGTACACTTGGAAGATTTATTCTGAAAGGCTCATGACTTTGGCGGGAGTTTACAGTTTCTGGAAATACGTTTCCAAATTAGAGAGGCGTGAAACTCGACGATATATTGAGATGTTCTACATCCTCAAGTTCCGCGATTTGGCAAAATCTGTCCCGCTAGCAAAGGATGATGCAAGTTAA 2448 0.4248 MAKQPSKPTLGRLPSIRDRVQDTLSAHRNELISLLSRYVAQGKGILQPHNLIDELDNIPGDEQAKLDLKNGPFGEIVRAAQEAIVLPPFVAIGVRPRPGVWEYVRVNVSELSVEQLSVSEYLSFKEELVDGKSNDNFVLELDFEPFNASFPRPSRSSSIGNGVQFLNRHLSSNMFRNKDSLEPLLDFLRAHKYKGHALMLNDRIHNISKLQAALAKTEDYLSKIPRDTPYSEFEYVLQGMGFERGWGDTAQRVLETMHLLLDILQAPDPSTLETFLGRVPMVFNVVILSPHGFFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKKQGLDFTPRILIVTRLIPDAKGTTCNQRLERVSGTDHTHILRVPFRSESGTLRKWISRFDVWPYLETYAEDVASEIAAELQGYPDFIIGNYSDGNLVASLLAYKMGVTQCTIAHALEKTKYPDSDLYWKKFDDKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTGFTLPGLYRVVHGIDVFDPKFNIVSPGADMSMYFPYSEKQKRLTSLHGSIEQLLYDTAQSDEYTGSLNDKSKPIIFSMARLDRVKNITGLVECFAKNSKLRELVNLVIVAGYIDVKKSSDREEIAEIEKMHGLMKEYKLNGDFRWIAAQTNRARNGELYRYIADTQGAFVQPAFYEAFGLTVVEAMTCGLPTFATSNGGPAEIIEHGISGFHIDPYHPEQASELLVEFFQKCKKDPSHWKKISEAGLQRIYERYTWKIYSERLMTLAGVYSFWKYVSKLERRETRRYIEMFYILKFRDLAKSVPLAKDDAS* 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2170 815 Pfam Glycosyl transferases group 1 572 746 IPR001296 GO:0016757
Pvu1g2170 815 Gene3D - 152 281 - -
Pvu1g2170 815 Gene3D Glycogen Phosphorylase B; 286 803 - -
Pvu1g2170 815 Gene3D Glycogen Phosphorylase B; 533 760 - -
Pvu1g2170 815 TIGRFAM sucr_synth: sucrose synthase 28 809 IPR012820 GO:0005985|GO:0016157
Pvu1g2170 815 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 301 769 - -
Pvu1g2170 815 Gene3D - 29 151 - -
Pvu1g2170 815 PANTHER - 7 815 IPR012820 GO:0005985|GO:0016157
Pvu1g2170 815 Pfam Sucrose synthase 12 559 IPR000368 GO:0005985|GO:0016157
Pvu1g2170 815 PANTHER SUCROSE SYNTHASE 7 815 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2170 Pvu-Chr1 47309963 47315951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2170 6 813 Glycosyltransferase AT4G02280 81.931 0.0 1421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2170 K00695 - gmx:100793371 1509.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2170 1 47309963 47315951 Pvu1g2170 1 47309963 47315951 ECH