Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2161 ATGGAACGTTCTACAAAACTCTTCTGGGTGTTGGTTCTATGCGTAGCTGTAATGGCACACCAGGCAGCTGCACTGGAAATACTAAAAGGAATAAATCCACTAATCGGTGTGGAAACACTAACAGGAAAGAGTCTAATCAACAAGGTATGCATATTGTCCCCAAGCAGAGACCTATGCGTTGAGGTCCTCTCTTCCGACAAACTCAGAAGCCCTACCGCAAACCTTAAAGACTTGGCAATCATTTCCCTTAGGTTTGCTGCCACAAACGCTTCCGGCATCCTCGCCGACGCCAAAACGCTCATTGACGACGACAGCCTGGAACCTGATGTCCAACAAGGTTTGGCTGATTGCAAGGAGAACATCTTGGACGCAGAGAGCCAATTGGAGGACACCATCGCTGCCTTGATGATCGATTCTGAAGCTGATGCACAACGTTGGCTCAGAGCTGCCTTGGCTGCCATCGACACTTGCGATGCCTCCATCCCCGGAGACGATGATGTTCTCTCTGTTAAGAGCGCCATCTTTCGCAAGCTCTGCAACATTGTCATCGTCGTCAACAAGGTCCTTGTTAATCCAACTTTGTTGTAA 588 0.4881 MERSTKLFWVLVLCVAVMAHQAAALEILKGINPLIGVETLTGKSLINKVCILSPSRDLCVEVLSSDKLRSPTANLKDLAIISLRFAATNASGILADAKTLIDDDSLEPDVQQGLADCKENILDAESQLEDTIAALMIDSEADAQRWLRAALAAIDTCDASIPGDDDVLSVKSAIFRKLCNIVIVVNKVLVNPTLL* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2161 195 Pfam Plant invertase/pectin methylesterase inhibitor 44 182 IPR006501 GO:0004857
Pvu1g2161 195 SMART PMEI_2 41 185 IPR006501 GO:0004857
Pvu1g2161 195 Coils Coil 114 134 - -
Pvu1g2161 195 PANTHER PECTINESTERASE 1 189 - -
Pvu1g2161 195 Gene3D Invertase/pectin methylesterase inhibitor family protein 42 190 IPR035513 -
Pvu1g2161 195 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 1 189 - -
Pvu1g2161 195 TIGRFAM PME_inhib: pectinesterase inhibitor domain 25 189 IPR006501 GO:0004857
Pvu1g2161 195 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 44 190 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2161 Pvu-Chr1 47256077 47256664 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2161 - - pvu:PHAVU_001G208600g 314.309