Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2155 ATGATGCTTTCCTCCAAACCACCGCGCCGGAAAATTGTTCCGGCAAACGGCGACGAGTCCGCAGATAAACTGGACCAGCTTCTCTTGTCCTCCGCCATCTGCAACAACGAGGACATAGGCCCGTTCATCCGGAAGGCCTTCGCCTCCGGCAAGCCGGAGATGCTCCACCACCACCTCCGTCACTTTGCCCGCTCGAAGGAGTCCGAGATTGAGGAAGTGTGCAAGGCTCACTACCAGGATTTCATCCTCGCCGTCGACGATCTACGATCCCTCCTCTCAGACGTTGATTCGCTGAAGTCCTCCCTCTCCGACTCCAACTCGCGGCTCCAGTCCGTTGCGCGCCCGCTCCTGTCGTCGCTCGACGCCTTCGTCGAGACGCGGAACGTCTCGAAGAACGTGAACCTTGCCATCGACTCCATCCGCGCGTGCGTCAAGCTGATGGAGGTTTGCACGCGCGCCAATCGCCACCTCGCGGACGACAACTTCTACATGGCTCTTAAGTGCATGGACACGATCGAGCGGGAGTATTTGGACCAAACGGCGTCGTCCACGCTGAAGCGGATGCTGGAGAAGAAGATTCCAGATATTCGGCTGTACATCGAGAGGAAGGTGAACAAGGAGTTCGGGGACTGGTTGGTTGAGATCCGAGTCGTGAGTCGCAATTTAGGTCAATTGGCGATAGGTCAAGCCTCGTCAGCGAGGCAGAGAGAAGAGGATCTAAGAATTAAGCAGCGGCAAGCGGAGGAACAGAGTAGACTCAGCGTGAGGGACTGTATTTACGCTTTGGAAGAAGAGGATGAAGACGGAATCATCGCTGGCGGGATCGGTGAAGACGGTGGTGGAGTCGCGGGGTTTGATTTGACTTCGTTGTACAGGGCATACCATATTCATCAGACTTTAGGGTTAGAGGATCGGTTTAAGCAGTATTATTTTGAGAACCGGAAGCTTCAGTTGACTTCGGACTTTCAGGTCTCGTCCATGACTCCTTTTCTGGAATCGCATCAAACGTTCTTTGCGCAGATTGCAGGGTTCTTTGTGGTGGAGGATCGCGTGTTGAGAACCGGAGGCGGGTTGATTTCAAAATTGGAGGTTGAGAATCTGTGGGAGATTGCTGTTAGTAAGATGTGTTCAGTACTGGAGGATCAGTTCTCCAGAATGCAAACTGCTAATCATCTTTTGCTTATTAAGGATTATGTGAGTCTGTTAGGAGTAACCCTGCGGAGATATGGGTACCCCATTGATGCGTTACTTGATGTTTTGAGCAAACACAGGGATAAGTACCACGAGCTGCTTTTGTCTGATTGTAGGAAGCAGATTGCGGAGGCGGTTGCGGCTGATAAATTTGAGCAGATGTTGATGAAAAAAGAGTATGAGTATTCCATGAATGTGCTTTCTTTCCAGATACAGACTACGGATATCATACCAGCTTTTCCCTATGTTGCCCCTTTTTCCACCACTGTGCCAGATTGTTGTCGGATTGTACGGTCATTCATTGAGGATTCTGTGAGTTTCATGTCTTATGGCGGGCAGCTTGAGTTCTATGAAGTTGTTAAGAAATATTTAGACAGACTTTTGATTGAGGTTTTGGATGAAGCTTTAGTGAAGCTTATCAATACCTCGATTAGTGGTGTCTCCCAGGCAATGCAAATGGCAGCGAATATGGCTGTCTTGGAGCGTGCTTGTGATTTTTTCTTCCGCCATGCTGCACAGCTTTCGGGTGTTCCCTTGAGAATGGTGGAGAGAAGCAGAAGGCAGTTTCCCCTAAGAAAAGCTCGTGATGCCGCAGAAGAGATGCTCTCCGGGCTACTCAAAACCAAAGTTGATGGATTTATGACCTTGATCGAGAATGTAAATTGGATGTGTGATGAGGCACCTCCGAGTGGAAATGAATATATAAATGAGGTTATAATTTATTTGGAAATTTTGGTTTCAACTGCTCAACAGATATTGCCATCTCAAGTCCTGAAGAGAGTATTGCAGGAAGTTTTTGCTCACATATCCGAGAAGATAGTTGGGACTTTAATCAGTGATTCTGTTAAAAGGTTTAATGTCAATGCTATTAATGGAATTGAAGTAGACATTCGGCTCTTAGAATCATTTGCTGATAATCAGGCCTCTCTTTTCTCCGATGGGGATGTTGATGTTTTGAAAGCATCACTTGCCAGTTCAAAGCAACTGATTAATTTGCTATTGAGTAATCATCCGGAGAACTTCTTGAATCCGGTGATAAGGGAGAGGAGTTACAACACTTTGGACCACAAGAAAGTGGTGATTGTTTCAGAAAAGTTGAGGGATCCTTCAGAACGGCTCTTTGGAACCTTTGGTAGTCGTGGGGCCAGGCAGAATCCGAAAAGGAAATCATTGGATACGTTGATAAAAAGACTTAGGGATGTTAGCTGA 2400 0.4763 MMLSSKPPRRKIVPANGDESADKLDQLLLSSAICNNEDIGPFIRKAFASGKPEMLHHHLRHFARSKESEIEEVCKAHYQDFILAVDDLRSLLSDVDSLKSSLSDSNSRLQSVARPLLSSLDAFVETRNVSKNVNLAIDSIRACVKLMEVCTRANRHLADDNFYMALKCMDTIEREYLDQTASSTLKRMLEKKIPDIRLYIERKVNKEFGDWLVEIRVVSRNLGQLAIGQASSARQREEDLRIKQRQAEEQSRLSVRDCIYALEEEDEDGIIAGGIGEDGGGVAGFDLTSLYRAYHIHQTLGLEDRFKQYYFENRKLQLTSDFQVSSMTPFLESHQTFFAQIAGFFVVEDRVLRTGGGLISKLEVENLWEIAVSKMCSVLEDQFSRMQTANHLLLIKDYVSLLGVTLRRYGYPIDALLDVLSKHRDKYHELLLSDCRKQIAEAVAADKFEQMLMKKEYEYSMNVLSFQIQTTDIIPAFPYVAPFSTTVPDCCRIVRSFIEDSVSFMSYGGQLEFYEVVKKYLDRLLIEVLDEALVKLINTSISGVSQAMQMAANMAVLERACDFFFRHAAQLSGVPLRMVERSRRQFPLRKARDAAEEMLSGLLKTKVDGFMTLIENVNWMCDEAPPSGNEYINEVIIYLEILVSTAQQILPSQVLKRVLQEVFAHISEKIVGTLISDSVKRFNVNAINGIEVDIRLLESFADNQASLFSDGDVDVLKASLASSKQLINLLLSNHPENFLNPVIRERSYNTLDHKKVVIVSEKLRDPSERLFGTFGSRGARQNPKRKSLDTLIKRLRDVS* 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2155 799 Coils Coil 230 250 - -
Pvu1g2155 799 PIRSF Sec15 3 799 IPR007225 GO:0006886|GO:0090522
Pvu1g2155 799 Gene3D - 413 585 IPR042045 -
Pvu1g2155 799 PANTHER SEC15 8 799 IPR007225 GO:0006886|GO:0090522
Pvu1g2155 799 PANTHER EXOCYST COMPLEX COMPONENT SEC15B 8 799 - -
Pvu1g2155 799 Gene3D Dsl1p vesicle tethering complex, Tip20p subunit, domain D 591 738 IPR042044 -
Pvu1g2155 799 Pfam Exocyst complex subunit Sec15-like 459 763 IPR046361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2155 Pvu-Chr1 47217568 47220249 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2155 K19985 - gmx:100796432 1439.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2155 1 47217568 47220249 Pvu1g2155 1 47217568 47220249 ECH