Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2154 ATGAACACAAGGTGTTCGATGATATTCCTTTGCATTCTGGCTTGTGCGTATGTGACCGTTTCAGAGGAATTATCAGCCTACGAAGTTCTTGAGAAATATGACCTTCCAGTGGGTCTTCTTCCGAAAGGTGTAACAGAGTACGAGCTAAACGAAAAAAATGGGCACTTCACTGCGTATCTGGAGAAAACGTGCTATTTCAGCGTACAATCGTATGAGCTAAAGTACAAGTCCACCATCAAGGGCGTGATCTCGAAGAGGAAGTTGTCGAAGCTGAAGGGTGTTAGCGTGAAAATTGAAGTGTTGTGGATCCCAATCTCGGAGGTCACTCGCGACGGTGATGACCTCAAATTCTCTGCCGGAGTTGCTTCTGCCGGTTTTAGCGCCGACAGCTTTTCGGAGAGCCCTCAGTGTGGATGTGGATTCCATTGCGACCATTTCAACCAAAACGGTGACGTTTCTTCTTCTCTTTAG 471 0.4671 MNTRCSMIFLCILACAYVTVSEELSAYEVLEKYDLPVGLLPKGVTEYELNEKNGHFTAYLEKTCYFSVQSYELKYKSTIKGVISKRKLSKLKGVSVKIEVLWIPISEVTRDGDDLKFSAGVASAGFSADSFSESPQCGCGFHCDHFNQNGDVSSSL* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2154 156 PANTHER T31J12.3 PROTEIN-RELATED 7 151 IPR007493 -
Pvu1g2154 156 Gene3D - 14 137 IPR036758 -
Pvu1g2154 156 PANTHER DUF538 FAMILY PROTEIN 7 151 - -
Pvu1g2154 156 Pfam Protein of unknown function, DUF538 26 131 IPR007493 -
Pvu1g2154 156 SUPERFAMILY At5g01610-like 11 143 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2154 Pvu-Chr1 47214196 47214666 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2154 - - gmx:100527514 244.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2154 1 47214196 47214666 Pvu1g2154 1 47214196 47214666 ECH
Pvu1g2154 1 47214196 47214666 Pvu7g2248 7 45769263 45770826 ECH
Pvu1g2154 1 47214196 47214666 Pvu7g2248 7 45769263 45770826 PCT