Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2150 AATAAGAAGAAAAAGAAGATGAAGAATGACTCTCTGATCCCTGAGCTATATCCAGAGTCTGAATATAACCCTAGTCGTGATGTTTTGGAAGGTGATGCACACATTAGCGTAGAGGACCTACTGAATTCTCTTAGTGAAAAGCCTACCTATGGAAAACTTAGGAAGAGAGAGCTTCAAATTATGAAGAATGATAGAACCGTACATGCACCACTTTCAAAGGCAATTCAAGCAAAGGTAGAGAGGACAGCAGCCTATGAAGTATCAAAGAAAGATGTCACCAAGTGGCAGCATATTATTCAGAGAAATAGAGAGGCATCAACTATTTTCTTTGGTGAAAATGTAAATCTAGGATTTTCAACTGTAGGAGCAATAGCTTCTGAGTTTGAACCCAGAACTGAATTTGAGAAGAAAATGGCTGCACTAGTTTATGATGATGAAGTTACGGAAGCCCATGAAAAGGATGGTTCTAAGCTTCTTGAAATGAACAAGGTGTCTATTGAAGATGAGAAGGATAGGCAAAACCGGATTGCTAAAATGCGGAGCCTTCTTTTTCGTCATGAAATGAAGGCAAAGCATATTAAAAAGATCAAGTCCAGAACATTTCATCGGTTGTTGAAGAAAGATAGGTTAAAGGCAGAAGCTTCTCAGATACAAATGGACCCTGAAGCTGCTGAAGAATATGCCATTAAACGAGAGCGTGAAAGGGCCGAGGAACGCATGACACTAAAGCACAAAAACCAGAATCGGTGGGCTAAGCGAATTATACAGCGAGGCTTAAATAGCCAAGATGAAGGAACTCGTGCTGCTATAGCTGAACAACATCAAAGACATGCTGAATTGACTAGAAAAATGCACTCTATGAAGGATAGCAGCAGTAGCAGTGAAGATACCAGTGATGAGGATGAAGATGAGAACTCTGTTGGTTCTGATCAGGAGAGGGCTTACAAGCTTTTGGGAAAAGCTAAAGATAAAACTATGAAAGTGTTGGAGGAAGAGGATGAAGTTCCCAAATCAGGATTGCTTTCTTTGCCTTTTATGAGGCGCGGATTGGAGAAAAGGAAAGAGGCAGCTGTTGAAGAAGCTAACCTTGCTTTCCAAGAATATGAAGATTCCCTGAAGAAACTGGAGAATTCTGGTGGCTTGAAAGATCCAAAAGCTGCTTCTGCCAGTGGTAGAAGAGTATTTGGACCAGCCAAAGCTCAGATATCTGATACCAGTATTGCAGTAAAATTAGATAACGGCTATGGTGGCAGTGATAGCGAGGATGACTTGGAAAACAGCAAAAGCGGCAACATGGAGAATACGGGAAGTGACCTTTTGCATAACAAGGATTCGGTTGTAACTCAAGAAGACACTGATACTCACCAGGAATCATTTTTTAAGAACATTGATGATATTGTTGAAAACCCTGGGCCTAAAACTACATGTGAAGTTTCCATATTTGTGTCAGATACATGGAAAAAGGCAAAGAACAAAAATGAAAGCACAAGTATAAAGAAGTCTCCAAAACTTACAGGGCCAGCTAGGCAAAATAAAAAAGATACTGAAAAGGAAATTGGAGAGGATAGTGATACCGATAGTGAAGGGCAGATGGTGGATGGAATTCTGTCTTCTGTTTCTAAAGTGCCTTATGAACTTCCTTCTCAAGAGGAGCTCATTCGGCAAGCTTTTGCAGGGGATGATGTAGAAGGTGATTTTGAAAAGGACAAGCAGGAGATCCTCGAGGAAGAAAATCCCGAGCAAGAAAAGCCTCTGTTACTTCCTGGCTGGGGCCAGTGGACACATATACAGGAAAAGAAAGGCTTACCATCTTGGATGCTGAAAAAACATGAAGATGCCCAGAAAAAAAGGGCAGAGGCCCTCAAAAAGAGGAAGGATGCTCGGCTAAAAAACGTGATTATATCTGAGAAGATAGATAAGAAGGCTGAGAAACTTCATACTAAATCTTTGCCTTTCCCGTTTACTTCGAAAGAGGTGTTTGAACAGAGCATGCGTGTGCCCATCGGACCTGAATTTAATCCAGCATCTGCAATTGGTCTTCTTAACCGACCAGAAGTGGTGAAGAAACCAGGTGTTATTATAAAACCAGTGGAGTTTGAAGACGTGAATCCTCATGAAAAATCAGAACAACGAAGTGGTGATAAGCGAAAGCTTAAGAAAAATAGTGGTAAACCCATGAAAAAGGCGAAAGTGGGAGGAAAAAAATAA 2208 0.4085 NKKKKKMKNDSLIPELYPESEYNPSRDVLEGDAHISVEDLLNSLSEKPTYGKLRKRELQIMKNDRTVHAPLSKAIQAKVERTAAYEVSKKDVTKWQHIIQRNREASTIFFGENVNLGFSTVGAIASEFEPRTEFEKKMAALVYDDEVTEAHEKDGSKLLEMNKVSIEDEKDRQNRIAKMRSLLFRHEMKAKHIKKIKSRTFHRLLKKDRLKAEASQIQMDPEAAEEYAIKRERERAEERMTLKHKNQNRWAKRIIQRGLNSQDEGTRAAIAEQHQRHAELTRKMHSMKDSSSSSEDTSDEDEDENSVGSDQERAYKLLGKAKDKTMKVLEEEDEVPKSGLLSLPFMRRGLEKRKEAAVEEANLAFQEYEDSLKKLENSGGLKDPKAASASGRRVFGPAKAQISDTSIAVKLDNGYGGSDSEDDLENSKSGNMENTGSDLLHNKDSVVTQEDTDTHQESFFKNIDDIVENPGPKTTCEVSIFVSDTWKKAKNKNESTSIKKSPKLTGPARQNKKDTEKEIGEDSDTDSEGQMVDGILSSVSKVPYELPSQEELIRQAFAGDDVEGDFEKDKQEILEEENPEQEKPLLLPGWGQWTHIQEKKGLPSWMLKKHEDAQKKRAEALKKRKDARLKNVIISEKIDKKAEKLHTKSLPFPFTSKEVFEQSMRVPIGPEFNPASAIGLLNRPEVVKKPGVIIKPVEFEDVNPHEKSEQRSGDKRKLKKNSGKPMKKAKVGGKK* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2150 735 Pfam Utp14 protein 3 699 - -
Pvu1g2150 735 MobiDBLite consensus disorder prediction 698 735 - -
Pvu1g2150 735 MobiDBLite consensus disorder prediction 261 313 - -
Pvu1g2150 735 Coils Coil 358 378 - -
Pvu1g2150 735 MobiDBLite consensus disorder prediction 269 294 - -
Pvu1g2150 735 Coils Coil 610 630 - -
Pvu1g2150 735 MobiDBLite consensus disorder prediction 1 24 - -
Pvu1g2150 735 MobiDBLite consensus disorder prediction 699 716 - -
Pvu1g2150 735 MobiDBLite consensus disorder prediction 376 397 - -
Pvu1g2150 735 MobiDBLite consensus disorder prediction 410 454 - -
Pvu1g2150 735 PANTHER U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 14 2 713 IPR006709 GO:0006364|GO:0032040
Pvu1g2150 735 MobiDBLite consensus disorder prediction 429 443 - -
Pvu1g2150 735 MobiDBLite consensus disorder prediction 488 534 - -
Pvu1g2150 735 MobiDBLite consensus disorder prediction 717 735 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2150 K14567 - gmx:100784007 1164.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2150 1 47180532 47185561 Pvu1g2150 1 47180532 47185561 ECH