Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2134 ATGGAATGGATGTGTCATTGTTCCAGTTTTCTTCTTTCGCCGGAGAACCCCAATTCGGCGTGCTCTCTTTCTCTTAACTACGCTCTCGTAATTCTCAATCAGAGTCTTCCCAGATTTGCTCCTCTGCTTTGGGACCACGCTCATGTGCGAGTGTGCGCCGATGGAGGTGCCAATAGGGTGTATGATGAAATGCCTCTTTTCTTCCCGCATCAACAACCTTCCCATGTTCGCTCCAGGTACAAGCCTGATGCAATTAAAGGAGATATGGATTCAATACGGACAGAAGTACTTGACTTCTATGCAAAACTGGGAACTAAGATAATTGATGAGTCGCATGATCAGGACACCACAGATTTACACAAATGTGTCACATACATGCGTGACCTCACCCCAAAGGTCGATGGATCAGAGCAATGCATTCTTGTTGCTGGAGCACTTGGTGGGAGATTTGACCACGAGATTGGAAATATTAATGTTCTCTGTCGATTTTCCAACACACGAATTATCCTTCTATCTGATGATTGCCTTATTCATCTTCTTCCAAAGAATCGGTATCATAAAATCTATATTCAATCTTCCGTTGAGGGTCCGCATTGTGGACTCATTCCAATTGGGATGCCGTCTGGAAGCTCTACAACCACAGGACTCAAATGGGACCTCAAGGACACGGCAATGAGATTTGGAGGTTTAATAAGCACATCGAATGTTGTAAAAGGGGAAATAGTTACAGTACAGTCTGATTCAGACCTTCTTTGGACTATTTCTATTAAGAAGCTCTAG 780 0.4372 MEWMCHCSSFLLSPENPNSACSLSLNYALVILNQSLPRFAPLLWDHAHVRVCADGGANRVYDEMPLFFPHQQPSHVRSRYKPDAIKGDMDSIRTEVLDFYAKLGTKIIDESHDQDTTDLHKCVTYMRDLTPKVDGSEQCILVAGALGGRFDHEIGNINVLCRFSNTRIILLSDDCLIHLLPKNRYHKIYIQSSVEGPHCGLIPIGMPSGSSTTTGLKWDLKDTAMRFGGLISTSNVVKGEIVTVQSDSDLLWTISIKKL* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2134 259 Pfam Thiamin pyrophosphokinase, vitamin B1 binding domain 186 251 IPR007373 GO:0009229|GO:0030975
Pvu1g2134 259 SUPERFAMILY Thiamin pyrophosphokinase, substrate-binding domain 177 258 IPR036371 GO:0009229
Pvu1g2134 259 SMART TPK_B1_binding_a_2_a 186 250 IPR007373 GO:0009229|GO:0030975
Pvu1g2134 259 PANTHER THIAMIN PYROPHOSPHOKINASE 4 257 - -
Pvu1g2134 259 PIRSF TPK1 3 259 IPR016966 GO:0004788|GO:0005524|GO:0009229
Pvu1g2134 259 Pfam Thiamin pyrophosphokinase, catalytic domain 42 168 IPR007371 GO:0004788|GO:0005524|GO:0009229
Pvu1g2134 259 PANTHER THIAMINE PYROPHOSPHOKINASE 1 4 257 - -
Pvu1g2134 259 Gene3D Thiamin pyrophosphokinase, catalytic domain 27 167 IPR036759 GO:0004788|GO:0005524|GO:0009229
Pvu1g2134 259 TIGRFAM thi_PPkinase: thiamine pyrophosphokinase 29 254 IPR006282 GO:0004788|GO:0006772
Pvu1g2134 259 SUPERFAMILY Thiamin pyrophosphokinase, catalytic domain 26 176 IPR036759 GO:0004788|GO:0005524|GO:0009229
Pvu1g2134 259 CDD TPK 28 254 IPR007371 GO:0004788|GO:0005524|GO:0009229
Pvu1g2134 259 Gene3D - 168 258 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2134 K00949 - gmx:100786303 495.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2134 1 47041169 47045687 Pvu1g2134 1 47041169 47045687 ECH