Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2133 ATGTTAGAAAAGTGTTTGGGAGCTCAAAGGGTGCGAAGATTCCAGAGAGCTCTCAGGCATTGCAAGGTCACCATCCTCTGCCTGGTCCTCACCATTGTTGTCCTGCGCGGCACCATCGGTGCTGGAAAATTCGGCACGCCCAAGCAGGACTTCCTCGACATTCGCGACCGTTTCTACTCCCGCAAGCTCCCTGATAATCACCGCCACCTCGGTGAGCTTCAATCCACGACGTCCGAAGATTCCACTTCCACCACCACCAATTACAACGCCTTCGACATCAACACCATATTGGTTGACGAACCAGACGACGAGAACGGCGAGAAATTGAACCCGCACGAGCCGTATCGTCTCGGCCCCAAAATATCGAACTGGGACGAAGAACGATCTCGCTGGCTTCGCAAGAACCCCAATTTGTCTAATTTCGTTCGGCCCAACAAGCCTCGTGTGCTTCTGGTAACTGGGTCGTCGCCGAAACCGTGCGAGAATCCCGTTGGGGATCATTACTTGTTGAAGGCTATTAAGAACAAGATTGACTATTGTCGTTTGCATGGGATTGAGGTGTTTTACAACATGGCTCTCCTTGACGCTGAGATGGCAGGGTTTTGGGCCAAGCTTCCTTTGATTCGGAAGCTTCTTTTGTCTCACCCTGAGGTTGAGTTTCTATGGTGGATGGATAGTGATGCCATGTTCACGGACATGGCGTTTGAGGTGCCGTGGGAGAGGTATAAAGACCATAACTTGGTGATGCATGGGTGGGATGAGATGGTTTATGATGACAAGAATTGGATTGGGCTGAACACTGGGAGTTTTTTGTTGAGAAATTGTCAGTGGTCTTTGGATATTCTTGATGCTTGGGCTCCAATGGGGCCTAAAGGGAGGGTTAGGGATGAGGCTGGGAAAGTGCTCACGCGTGAGCTCAAGGATAGACCTGTTTTTGAGGCTGATGATCAATCTGCCATGGTTTATCTGCTGGCTAGGGAGAGGGACAAGTGGGGTGATAAGGTTTATCTTGAGAACGGTTATTACTTGCATGGTTATTGGGGGATTTTGGTTGATAAGTACGAGGAGATGATTGAGAATTACCATCCTGGTCTTGGGGATCATAGGTGGCCATTGGTGACTCATTTTGTGGGGTGCAAGCCTTGTGGGAAGTTTGGGGATTACCCTGTTGAGAGGTGCTTGAAACAGATGGATAGGGCCTTCAATTTTGGGGATAATCAGATTCTGCAGATTTATGGATTCACGCATACATCGTTGGCTAGTAAGGGAGTTAAGAGAATACGTGACGAGACTAGCAATCCCCTTGAGGTCAGGGAGGAACTTGGGTTGCTTCATCCAAGCATTTAA 1347 0.4907 MLEKCLGAQRVRRFQRALRHCKVTILCLVLTIVVLRGTIGAGKFGTPKQDFLDIRDRFYSRKLPDNHRHLGELQSTTSEDSTSTTTNYNAFDINTILVDEPDDENGEKLNPHEPYRLGPKISNWDEERSRWLRKNPNLSNFVRPNKPRVLLVTGSSPKPCENPVGDHYLLKAIKNKIDYCRLHGIEVFYNMALLDAEMAGFWAKLPLIRKLLLSHPEVEFLWWMDSDAMFTDMAFEVPWERYKDHNLVMHGWDEMVYDDKNWIGLNTGSFLLRNCQWSLDILDAWAPMGPKGRVRDEAGKVLTRELKDRPVFEADDQSAMVYLLARERDKWGDKVYLENGYYLHGYWGILVDKYEEMIENYHPGLGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMDRAFNFGDNQILQIYGFTHTSLASKGVKRIRDETSNPLEVREELGLLHPSI* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2133 448 Pfam galactosyl transferase GMA12/MNN10 family 146 385 IPR008630 GO:0016021|GO:0016757
Pvu1g2133 448 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 4 447 IPR008630 GO:0016021|GO:0016757
Pvu1g2133 448 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE-RELATED 4 447 - -
Pvu1g2133 448 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 145 294 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2133 Pvu-Chr1 47037384 47040118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2133 1 446 Glycosyltransferase AT3G62720 76.392 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2133 K08238 - gmx:100794266 843.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2133 1 47037384 47040118 Pvu1g2133 1 47037384 47040118 ECH