Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2132 ATGGCTTCCGATGACTTCAAACATCGACTCACACCGCATTCAGACACCGCCATCAACCAAAAGGGGAGGATCGGAGACAAACGGCAAAAACGAAAGGTGATGGCCAAACGCGGCCTAAAGTCACTCGCCATAGCTGTTACCCTCCCCCTCTCTCTCACCGTCTTATCAGCATGCATAGGCTTCTCCACTGCCCGTGATGATTCTCTCTCTTCCAGAAGGCCCTTCTGGTTCCCACCCTCCTGGGCACTGCACTTGACCTGTCCCGCTACAAGCTTCTTAATGGGTCTGGCCGCGTGGATGGTGTGGGCAGACGGAGGTTTCCACACAAACCCCATGGCTCTGTTGCTTTACTTCACTCAGCTGCTTTTGGCGGTGCTCTGGGATCCTCTTGTGTTCGCTGTTGGGGCTACACGGGTGGGCCTGATGGTCTGTTTAGGGCTGTTAGTGAGCCAGTACGGGTGCATGCGTGCGTTTGGCTCCGTCAATCCCTTTGCTGCTGGTCTGATAAAGCCTTGCCTCGCATGGGTTGCTTTTCTATCTGTACTAAATCTTAAGCTCCTTTTTGTCTGA 570 0.5368 MASDDFKHRLTPHSDTAINQKGRIGDKRQKRKVMAKRGLKSLAIAVTLPLSLTVLSACIGFSTARDDSLSSRRPFWFPPSWALHLTCPATSFLMGLAAWMVWADGGFHTNPMALLLYFTQLLLAVLWDPLVFAVGATRVGLMVCLGLLVSQYGCMRAFGSVNPFAAGLIKPCLAWVAFLSVLNLKLLFV* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2132 189 Gene3D TspO/MBR protein 37 188 IPR038330 -
Pvu1g2132 189 PANTHER TSPO/MBR FAMILY PROTEIN 21 188 - -
Pvu1g2132 189 CDD TSPO_MBR 46 187 IPR004307 GO:0016021
Pvu1g2132 189 PANTHER PERIPHERAL-TYPE BENZODIAZEPINE RECEPTOR 21 188 IPR004307 GO:0016021
Pvu1g2132 189 Pfam TspO/MBR family 48 187 IPR004307 GO:0016021
Pvu1g2132 189 PIRSF PBR 31 189 IPR004307 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2132 Pvu-Chr1 47035409 47036480 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2132 K05770 - gmx:100785785 260.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2132 1 47035409 47036480 Pvu1g2132 1 47035409 47036480 ECH