Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2130 AGTTGGAATTGTAATTTTAATCAGAGCATGGACGGACATGATTCTGAATACCCAAAGCAAAGCACTGCTGATATGACAGCTTTTGTGCAAAATCTTCTCCAGCAGATGAAAATTAGGTTCCAGACAATGTCTGACTCCATCATTACAAAGATTGATGAGATGGGAAACCGTATAAATGAGTTGGAACAAAACATCAATGATCTAAGAACAGAGATGGGAGTGGAGAGCACTCATCACCTGTGGCCCCTGTTGCCCGTGCTAAGCCAACGGAAGAAGAATCTAACAAAGAATAAGCTTATATACTGTGAGGTTGCTAGAATGCGCCGGTGGGACTCTGAGTCCATTCCAAACTCACCCTCTTCCATGCACTCCTCTATGGAGCCTTGGCAAGGTGCTGTTGTCTTAGGCACCAACCTTAGACGGTGCTCACCTATTGCACCTACTATGGAGAGACTAATGGACATAGCCACCAAGAACATGGCCAAGAGAAAAGAAGCATTTGACATTGTTTTGAAGTGA 519 0.4393 SWNCNFNQSMDGHDSEYPKQSTADMTAFVQNLLQQMKIRFQTMSDSIITKIDEMGNRINELEQNINDLRTEMGVESTHHLWPLLPVLSQRKKNLTKNKLIYCEVARMRRWDSESIPNSPSSMHSSMEPWQGAVVLGTNLRRCSPIAPTMERLMDIATKNMAKRKEAFDIVLK* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2130 172 Gene3D - 18 65 - -
Pvu1g2130 172 PANTHER HEAT SHOCK FACTOR-BINDING PROTEIN 1-LIKE 10 78 - -
Pvu1g2130 172 Coils Coil 44 71 - -
Pvu1g2130 172 PANTHER HEAT SHOCK FACTOR BINDING PROTEIN 1 10 78 IPR009643 GO:0003714
Pvu1g2130 172 Pfam Heat shock factor binding protein 1 24 72 IPR009643 GO:0003714
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2130 Pvu-Chr1 47025549 47027949 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2130 K19765 - gmx:100781854 124.79