Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2121 ATGGATTCTCGTTGCTTTGATGACTACAAAGAAGAAAGTGAAGATAAATATGCTGAAGGATTTGGAGATAAGTTTGGGGATCCAGAAGTTCAGCCTCGTGTTGGAGAGGAGTACCAAGCAGAAATTCCTCCATTGATTTCAGCACCTTATCGTTCTCTGATTGTAGAGAAGACTAGAGATTCAGAAATCACGGTCAACTTGCAAGAGTGTATTTCACTAGGGCTTCCCATTCCTCTTAAGTGGGCACATTGCGAATTTGAAGTTAGTTGTGGCTGTGGGAGTTTAGGATCTGTCAGAAGTGAAGTGGGGCCAGCTATTTCTGAGAATGAATGTTTGAAAATGAAAGTGGAACTTTACGCTGCTTCACACGGTGAAGAGAGACATATAGGAGGGTTCTCAAATTTTGAACCATCTTCAAATGAGAAGGATCGGACAAGAGGAAAGTATCTTCTCCCTGGATTGTTGGACGATCAATCATGGACAGATATTGAATACAGCAGTTTTCTTCTTGGCCTCTATGTCTTTGGGAAGAAGCTTAATTTTTTGAAGAGATTTGTTGGGAGTAAAAGTATGGGAGACATATTGTCTTTGTATTACGGAAAGTTTTTTAAGTCTAAAGAATATTGTAGATGGGCAGAGTGCAGAAAGTTGAGAACTAAGCGCTGTATATATGGCCGGAAAATATTCACAGGATGGAGGCAACAAGAGTTGCTGTCAAGATTATTTTCGTACTTGCCAAGGGAGCGTCACACTACATTGATTGAGATTTCAAGGAATTTTGGGGAGGGAAAGATGCCTTTTGAAGAATATGTATTTTCTTTAAAGGATGCAGTTGGCATTGACTTGCTTATAGCTGCAGTAGGTATTGGAAAAGGGAAGCAAGATCTCACTGGCACTGCTGTTGAGCCAACAAAGACCAATCACATCTTCTCTGTTCGCCCTGAAATACCAATTGGCAAAGCTTGCTCCTCTCTTACATCTGCAGAAATAATCAAGTTTCTCACAGGAGATTTTAGGTTGAGTAAAGCACGATCCAGTGATCTCTTCTGGGAAGCTGTTTGGCCTCGTCTTTTAGCAAAAGGCTGGCATTCGGAACAGCCTAAAGATCAAGTTGTTTCTGGATCAAAGCAGTCTTTGGTTTTTCTTGTACCAGATATTAAGAAATTTTCAAGAAGGAAACTGGTAAAAGGTAACCACTACTTTGATTCTATAAGTGATGTGTTGAATAAAGTAGCATCTGACCCTGGGCTTCTGGAGACTGAAAGTCAAGCAACTGAGTGCAGTGTAGATAGGGAAAAAACACCTGACAAACGAGTTCTAGAGGGGGTGTCATGTGGGGAACAAGTTCAGTACCTTCAATCTCATAGTTCAAAGTGCAATCAAGATCTCACGAAATTTACAATTGTAGATACCAGCATGGTTCATGATATGGATCAACGTAGAGTGAGACAGATGAGAAGCTTACCTTCTCAAACTATGAATATATCTACTATCTCAAGCTGCTCTAGTGAATCTGAGAAAGATACATCTTACGAATCAAAAGATCAGGTTCAACAAGATAATACTTTGAGTCCTAGCAAAGATCGGGTTGAGCAAGATAATGCTTCAAGTGCTATTGAAAATCAGGTTGAAAAATCTCATGTGTCAAGCTCTGTTGATGAATGGGTTGAACAAGCTCATACTTCTAGCCCTATGGTTGAACAATCTCATGCTTCAGGTCCTATTAAAGATCGGGTTGAACAAGCTCATGCTTCAGGCCCTATTGAAGATCGGACTGAACAAACTCATGCATCTGGCTCTGTTGAAGATCAATTTAAACAAGCTAGTTCTTTGTATCCTAGTGAAGATCAGGTCGAACAAGCTAATTCCTCAAACCCTATTGAAGAATTCTCTGATAAGGGGTTGTGCATAGACTCATCAGATTGTACTCACGTTCCTGAGGCCCTCAACATCAACAAGGACGTAAAATATCATAGATTTCATTCTGATTTGCATAATGGTGAGCATTTAAGGGAGATCAATGAGCACCCCTTTTTTCAAAAGATGACCTCAGATTGCACTATTCCCTGCATCACGGCAATGCAGAAGTTAAGAGCTTGTAGCCATGGAGAAATCAGTCACTGCACTAAAAGTACTTCTGTGGATAGAAACTTTGATTTAAATGAGCCTATCTCACCATCAAATCTGCAAGAAGCATCTGAGGACATGGTTTTTTCTATGGATTTTGGAAATTTATCTTTACCAAATTATCTGGCTAAAGGCAGTCCGTCCAACATGAGCCATGAAGGCAGTGCCACCGAGAACTGCCTGGTTAGAGAAGAGTCTGCAGAAAATTCTGAAACCAGGATGTTGATTGACTTGAATTTTCCTCATGTTGCACCTGATTTAGGACTTGAAATGGAAATACCATCCTCTGGGGCCCCAGTGCAAAATCACAATCAATTAGCAAATACATCATCATCTCCATCTGAAATAACCCAGTTCAATGCCACACAGGAGTTTACTGATGGCAACAACGAGCAGCAGTCTATCCTTGTCAACCGTCGTCAGAGCACAAGGAACCGACCATTGACTACAAAAGCATTGGAAGCACTTGAGTACAGATTTATCAACTCAAAGAGGAAAAGAAAGAACACCGAATGTTCAGACAATAATCCAAAATCTAAATGTGTTCGTGTAAGTAGTGGGACAATTGTTAGTGCTAGTTGTGATGATGGCATTGAGGATTCTATGGTGGATACAATAGCAGAGGAGGAGAATGTTATCCAGGCATATAGTTATGGCATCGATCTTAATAGAGGCCCTCTGTAA 2811 0.4052 MDSRCFDDYKEESEDKYAEGFGDKFGDPEVQPRVGEEYQAEIPPLISAPYRSLIVEKTRDSEITVNLQECISLGLPIPLKWAHCEFEVSCGCGSLGSVRSEVGPAISENECLKMKVELYAASHGEERHIGGFSNFEPSSNEKDRTRGKYLLPGLLDDQSWTDIEYSSFLLGLYVFGKKLNFLKRFVGSKSMGDILSLYYGKFFKSKEYCRWAECRKLRTKRCIYGRKIFTGWRQQELLSRLFSYLPRERHTTLIEISRNFGEGKMPFEEYVFSLKDAVGIDLLIAAVGIGKGKQDLTGTAVEPTKTNHIFSVRPEIPIGKACSSLTSAEIIKFLTGDFRLSKARSSDLFWEAVWPRLLAKGWHSEQPKDQVVSGSKQSLVFLVPDIKKFSRRKLVKGNHYFDSISDVLNKVASDPGLLETESQATECSVDREKTPDKRVLEGVSCGEQVQYLQSHSSKCNQDLTKFTIVDTSMVHDMDQRRVRQMRSLPSQTMNISTISSCSSESEKDTSYESKDQVQQDNTLSPSKDRVEQDNASSAIENQVEKSHVSSSVDEWVEQAHTSSPMVEQSHASGPIKDRVEQAHASGPIEDRTEQTHASGSVEDQFKQASSLYPSEDQVEQANSSNPIEEFSDKGLCIDSSDCTHVPEALNINKDVKYHRFHSDLHNGEHLREINEHPFFQKMTSDCTIPCITAMQKLRACSHGEISHCTKSTSVDRNFDLNEPISPSNLQEASEDMVFSMDFGNLSLPNYLAKGSPSNMSHEGSATENCLVREESAENSETRMLIDLNFPHVAPDLGLEMEIPSSGAPVQNHNQLANTSSSPSEITQFNATQEFTDGNNEQQSILVNRRQSTRNRPLTTKALEALEYRFINSKRKRKNTECSDNNPKSKCVRVSSGTIVSASCDDGIEDSMVDTIAEEENVIQAYSYGIDLNRGPL* 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2121 936 MobiDBLite consensus disorder prediction 1 30 - -
Pvu1g2121 936 PANTHER ATROPHIN-RELATED 2 924 - -
Pvu1g2121 936 MobiDBLite consensus disorder prediction 573 590 - -
Pvu1g2121 936 PANTHER ARGININE-GLUTAMIC ACID DIPEPTIDE REPEAT PROTEIN 2 924 - -
Pvu1g2121 936 MobiDBLite consensus disorder prediction 486 506 - -
Pvu1g2121 936 MobiDBLite consensus disorder prediction 515 569 - -
Pvu1g2121 936 MobiDBLite consensus disorder prediction 591 605 - -
Pvu1g2121 936 MobiDBLite consensus disorder prediction 1 23 - -
Pvu1g2121 936 MobiDBLite consensus disorder prediction 486 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2121 Pvu-Chr1 46974052 46979205 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2121 - - var:108329239 1625.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2121 1 46974052 46979205 Pvu1g2121 1 46974052 46979205 ECH