Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2118 ATGATTTCTGCAGGAGGTAGGGATGCAATAAAGGGGCTGGGTTTAGGGTTAGGGTTAGGGCTGGGTGCTGGGAGGAGAGAGATGATGGAGTCTGAGCTCGAAGAGGGTGAGGCCTGCTCCTTTCAGAACCATGAGGATTATGATGCCACCGTTGATCCCGATGTTGCCCTCTCTTACATTGATGAAAAAATTCAAGATGTTCTGGGACACTTTCAGAAGGATTTTGAGGGTGGGGTGTCTGCTGAGAATCTTGGGGCAAAATTTGGTGGTTATGGATCATTTTTGCCCACCTATCAGCGATCTCCTGTTTGGTCTCATCCAAGGACTCCACAAAAAAATCATAGTCAAAATACACCCAAATCTCCGAATAATTTGCTGCCAGAGGGTGGGCAGGGCGATGCTGTACAATGTTCGACTGGAACTCAGTCATCAAGACTTGGCACAGGTTCTGGTAACTCTTCGGGGATAGCTGCAAACAAGGGTCTCTATTTAAATGATGGAACCCATCAAGAAAAATACTTGATAACCACTAATGTTGATACATCCACTTCTAAGCATGAGTCTCTAAACAAGAAAATTACTAGCACATCGGACCAGAAGACACTGAAGGTTCGAATCAAAATGGGTCCAGATAATTTGTCAACACGGAAAAATGCTGCAATATACAGTGAAATTGGTCTGGATGTGTCACCATCATCATCACTAGATGACAGCCCCTCAGAAAGTGAGGGGATTTCTCGTGGTCCTCAGGAAGCTCCTTTTGAATCTCCAACCATTATCCTTCAGATTATGACCGACCTCCCTCAGCTATTGTCACCACTTTCTGAAGGTATCATCGAATTAACTATAAAGGAAATGCGTGCCAGAGATAGCATCCCTGGTCTTGTTCATCTGGATGATGCAGAAAGTTTTGACATATCACTAAATGAATCTAATAATGTGAAAGGAGATAGAAAATTCTCAGGGGGGAGTGGGAGGAAAATGAAATCTCTGGAGGGTTGTGAATCCTCAATGGAAGTCAAGGGTTCTACAAAGAAGAATGCTCAGATTGAGACTGGAGTGTTGTCAAGAAAGGAACAAAGTACAGATGCATCTACTATGGAGGAGCTAGTTTCAAACACTATGAAGCTTCCACTTTTATCCAGTTCATATTCTTTCAGTGATGACTTGGTTAGGGTTGATGATGGGCCATGTGATTCTTTGAAGGAAGCCCACAAAGTTACGGAGAGGGAGAAAACCTTCTCTGTTCAGGGACAAAAGGAATGGCCGGAGCCAACATCTACTGAGGTGAATGGTTTTGCTGAGAGGGGGAAGGGAAGCTCAAGAAGAAAAGTTATGGGCGATAAGGTTCCTTTTGATGACTATATAGTGAAAGAAAATTCTCATGGGGATTATAATTGCCACTCAATAATAGCTGAATCTAATGTTTCTAAAGTTAGGACAACATCAAACACTGAAGAGCCTCCTAAGAAGGCCAATCAGAGAGGTAGCCTATGTGAACAAGACAGTATGGCATTACCTGTTGTGACAGAACATCCCTTTCTGGTTGCTAAGAAGAAGACAAAGGGAAGTCATGACACCATGGTTATGGAGAAGGAAAAAGAAAACTTGAAGATTGGATCCTCTTCGGTTCCTAAAACAAAAAGGAGTTCCGATGACAGTTCTGCATCAAAAAATGAGACTGAAGATGTTAGAGTACAAAAGAGTCTAGGAAAGACTAGAGATACATATAGAGATTTCTTTGGAGAATTGGAAGACGAGGAGGACAAAATGGATGCACTGGAGACCCCTTTTGAAGAAAAACTGAAGGAATCTCAGTTGGTTGGGAGGAGTGCACCTACAACTAGTCGTGGAGCAAAGGAGAGACCAGGTGCTAAGAAAGTTGATAAGCTGTTAACAGATGAAATGTACTCTAAAACAGCCTCAAATATTTGGTGCACTGGAAATGCAAATGGAACTGCTGTAGAGAATGGTAAAGGGATTCCTGTAATGATACCTCCTGTTGAGTCAGATGATAATTGGGTGATGTGTGAGAGTTGTCATCAATGGCGTCTTCTTCCTGTTGGAACAAATCCTGATCACCTACCTGAAAAGTGGCTGTGTAGTATGCTTAATTGGCTGCCGGACATGAATCGATGTAGCTTTAGTGAGGATGAAACCACTAAAGCACTTATTGCATTATACCAAGCACCTCCTTTTGACGGTCAAAGCAGCCTGCAGAATGTCTCTGGCAGTGTTATGGTGGGAGGAGCCATGGCAACATCCCAGCATCCTGACCAACAACAGCTAAATAATGATGTGCATGCAGTTCCTCGGGGGAAGAAAAAGTTTGTGAAGGAGATACCAAATCCTATAAATAAAGACAACTTTTCTCAATCATCATATCCTTTCAAGAAAAACGTGTTGTCTGCAGTGAAAAGTAGGAGTTTAAATGATGTGAACAAATCTCCTGTCATGAGTGAGGCTGATGTTCCAACAGAGAAACACAAAAATAAGCGTAGGACGCTTGAGCGCAGTTCTGATATAGGTGATACAAAGAATATGAAGGTCAAAAGCAGGAGGGATCATGATGAAGATTTTTCTAGGCCATCCAAGAAATCTAAGAGTCACAAGGCTCACTCTACCAATGAAGAGTGGACTGTAGAACAGAGTGGGACTACTAGGAAGGTGGGTGTTCAAAGTTCAAATAGCACTTTTCCAACTACTTCAGTTGGCAAAGATCGACCAAGACAGAAAGCCCACTCCTCTTCAAGGGACTCCAAATCAAGAAAAGACAAGATTCCAGTTTCCGCTGAAAACACAAAAGATAAAGGTCATGGTTCGTTGGATGAGGGATCTCTTGATCTGGGGAATTGTGATTCAATTGGTAGTGTGAAAAAGAGGAAACTTAAGGGATATCAAGATGCTATAACTTACAGCCCAGGAAATCCTCGCATACAGGAGAGCAAAACTTCTGAGCATGATTTCAGTGATTCAAGGAAGGAAAAGAAGGCAAAAAGTTCAAAATCTGGAGGCAAAGAATCAAGTACCAGTAAAGGCAGTGGTAGGACTGACAAAAAAGTTAGTCATGCAAAAAACCAAAAATTCAAGCAAAACCCTGAGAGCAGTCTGTCACATCGGAGCTTGGATGGCATGGACTGTTCTAAAAGGGACTTGGGGTCTTTACAGGTTTCAGTTGCTGCCACTTCAAGCTCTTCCAAGGTTTCTGGCTCTCACAAAACCAAAGCCAGCTTCCAAGAAGCGAAGGGCTCACCTGTGGAATCGGTGTCTTCATCACCTATTCGAATTTCAAATGCTGATAAGTTTTCAAACAAGGAAATTACTGGGAAAGATGATTCGCATGAGATTGCTGTTGTAGATAGTCCAAGAAGATGCTCAAATCGTGATAATGATGGTGGGATTGATCGATCTGGAACAGCCAGGAAGGAGAAATCTTTAACCGTTGCGAACAGGCCAGATTTTCAGGACAAAGGTGTTAATTACATGTCCGATACTAAGATTAAAGCTGAAACAATCGGCTATTGTACAAATGGTGGTGTTGACACCATAATCCCCGATGGGACCTATGCAGGCAAAGAGCAGATTAAACATCCAGGTGAAGACAAAACTGATGTTTCTTATGCTAATATGTCTCATACAAGGAAGAATGGCATGGAATCTGGTTTCGAGGACAACAATGACGGCTGTAAGTCAGAGTCCCATGTAGATAAGGTCAAGGTCAAGAATGCTAGTTCTTCAAGTCAACTGAAAAACCAGTCTCCTCTAGGTGAGGCAAAACATAAGGATGGAAAAAATAAGTTGCAGGAGAAGTTCGGGATCAAGCCTGACCAAAGTGAGAATATACATCCTGTCAAGAAAGATTATACAGAGAAAAATGAGACTAGGAAAAAAGAGAATCACTTAATTCGAGGTCATGACTTTCAAGATGTTAGTATGGATGCCCTTTGCAAACAGGATGCATTTCAAGCTCCATCTCAGACTCAGTTGCCAGACTCTGATAGATCCACAAAGAAGTCTCTGTTGGAAAGAACTGATCAAGAAGTACATGGAAAAGGGAAGCTGTTGTCATCACGACCAGTTGGTTTACTTAAAGGAAATGGAGATGTCGAAGTTGGTCCTTCCAAAGTCGATGATGCGTCAAAGCTGCCAAAAAAGCAATTGAAAAAGACCGACCATCAAAATGGAAATCAGCAAACTGGTTCGAGAAATCCCATACTTAATGGTCACAAGTCGAAGGAGCTTGATGCCCCTAGTCCAGTTAGAAGGGATTCTTACAGCCATGCTGCCAACAATGCTGTGAAAGAAGCTAAAGATCTTAAGCATCTGGCTGATCGTCTTAAGAATTCTGGATCTGGTGAAAGCACTAGTCTTTACTTCCAGGCAGCCCTCAAATTTCTTCATGGAGCCTCTCTGTTAGAATCTGGCAACAGTGATAATGCTAAACACAGTGAGATGATTCAATCAAAGCAAATGTATAGTAGCACTGCAAAATTGTGCGAGTTTTGTGCTCATGAATATGAGAAATCAAAAGACATGGCTTCAGCTGCACTTGCCTACAAATGCATGGAGGTAGCATATATGAGGGTAGTATATTCTTCACACACTAGTGCAAGCAGAGATCGGCATGAGTTGCACAATACACTGCAAATGATTCCTCTTGGCGAGTCTCCATCATCATCTGCCTCTGATGTTGACAATGTTAACAACTCTACAGCTGCTGACAAGGTTGTCACCATATCTAAGAGTGTCAATTCGCCCCAAGTAGCTGGAAACCATGTTATTGCTGCACGACATCGTCCAAATTTTGTGCGATTGCTTGGTTTTGCTCAGGATGTTAATTTTGCCATGGAAGCGTCAAGGAAATCACGGAATGCTTTTGCAGCTGCTAATTCAAGCCCTGGTGTGGGCAAGAATACAGATGGTATCTCCTCTATCAAGAAGGCTCTTGATTTTAGCTTTCAAGATGTGGAGGGGTTACTTCGTTTGGTACGGATTGCTGCGGAGGCCATTAATCGTTAA 5019 0.4244 MISAGGRDAIKGLGLGLGLGLGAGRREMMESELEEGEACSFQNHEDYDATVDPDVALSYIDEKIQDVLGHFQKDFEGGVSAENLGAKFGGYGSFLPTYQRSPVWSHPRTPQKNHSQNTPKSPNNLLPEGGQGDAVQCSTGTQSSRLGTGSGNSSGIAANKGLYLNDGTHQEKYLITTNVDTSTSKHESLNKKITSTSDQKTLKVRIKMGPDNLSTRKNAAIYSEIGLDVSPSSSLDDSPSESEGISRGPQEAPFESPTIILQIMTDLPQLLSPLSEGIIELTIKEMRARDSIPGLVHLDDAESFDISLNESNNVKGDRKFSGGSGRKMKSLEGCESSMEVKGSTKKNAQIETGVLSRKEQSTDASTMEELVSNTMKLPLLSSSYSFSDDLVRVDDGPCDSLKEAHKVTEREKTFSVQGQKEWPEPTSTEVNGFAERGKGSSRRKVMGDKVPFDDYIVKENSHGDYNCHSIIAESNVSKVRTTSNTEEPPKKANQRGSLCEQDSMALPVVTEHPFLVAKKKTKGSHDTMVMEKEKENLKIGSSSVPKTKRSSDDSSASKNETEDVRVQKSLGKTRDTYRDFFGELEDEEDKMDALETPFEEKLKESQLVGRSAPTTSRGAKERPGAKKVDKLLTDEMYSKTASNIWCTGNANGTAVENGKGIPVMIPPVESDDNWVMCESCHQWRLLPVGTNPDHLPEKWLCSMLNWLPDMNRCSFSEDETTKALIALYQAPPFDGQSSLQNVSGSVMVGGAMATSQHPDQQQLNNDVHAVPRGKKKFVKEIPNPINKDNFSQSSYPFKKNVLSAVKSRSLNDVNKSPVMSEADVPTEKHKNKRRTLERSSDIGDTKNMKVKSRRDHDEDFSRPSKKSKSHKAHSTNEEWTVEQSGTTRKVGVQSSNSTFPTTSVGKDRPRQKAHSSSRDSKSRKDKIPVSAENTKDKGHGSLDEGSLDLGNCDSIGSVKKRKLKGYQDAITYSPGNPRIQESKTSEHDFSDSRKEKKAKSSKSGGKESSTSKGSGRTDKKVSHAKNQKFKQNPESSLSHRSLDGMDCSKRDLGSLQVSVAATSSSSKVSGSHKTKASFQEAKGSPVESVSSSPIRISNADKFSNKEITGKDDSHEIAVVDSPRRCSNRDNDGGIDRSGTARKEKSLTVANRPDFQDKGVNYMSDTKIKAETIGYCTNGGVDTIIPDGTYAGKEQIKHPGEDKTDVSYANMSHTRKNGMESGFEDNNDGCKSESHVDKVKVKNASSSSQLKNQSPLGEAKHKDGKNKLQEKFGIKPDQSENIHPVKKDYTEKNETRKKENHLIRGHDFQDVSMDALCKQDAFQAPSQTQLPDSDRSTKKSLLERTDQEVHGKGKLLSSRPVGLLKGNGDVEVGPSKVDDASKLPKKQLKKTDHQNGNQQTGSRNPILNGHKSKELDAPSPVRRDSYSHAANNAVKEAKDLKHLADRLKNSGSGESTSLYFQAALKFLHGASLLESGNSDNAKHSEMIQSKQMYSSTAKLCEFCAHEYEKSKDMASAALAYKCMEVAYMRVVYSSHTSASRDRHELHNTLQMIPLGESPSSSASDVDNVNNSTAADKVVTISKSVNSPQVAGNHVIAARHRPNFVRLLGFAQDVNFAMEASRKSRNAFAAANSSPGVGKNTDGISSIKKALDFSFQDVEGLLRLVRIAAEAINR* 1673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2118 1672 MobiDBLite consensus disorder prediction 134 156 - -
Pvu1g2118 1672 MobiDBLite consensus disorder prediction 1392 1406 - -
Pvu1g2118 1672 MobiDBLite consensus disorder prediction 602 625 - -
Pvu1g2118 1672 Coils Coil 1429 1449 - -
Pvu1g2118 1672 MobiDBLite consensus disorder prediction 228 253 - -
Pvu1g2118 1672 MobiDBLite consensus disorder prediction 1055 1092 - -
Pvu1g2118 1672 MobiDBLite consensus disorder prediction 1374 1391 - -
Pvu1g2118 1672 MobiDBLite consensus disorder prediction 822 877 - -
Pvu1g2118 1672 MobiDBLite consensus disorder prediction 102 125 - -
Pvu1g2118 1672 MobiDBLite consensus disorder prediction 1028 1042 - -
Pvu1g2118 1672 MobiDBLite consensus disorder prediction 409 445 - -
Pvu1g2118 1672 MobiDBLite consensus disorder prediction 981 1003 - -
Pvu1g2118 1672 MobiDBLite consensus disorder prediction 520 539 - -
Pvu1g2118 1672 MobiDBLite consensus disorder prediction 1123 1144 - -
Pvu1g2118 1672 MobiDBLite consensus disorder prediction 102 156 - -
Pvu1g2118 1672 MobiDBLite consensus disorder prediction 878 905 - -
Pvu1g2118 1672 Gene3D - 665 723 - -
Pvu1g2118 1672 ProSiteProfiles Zinc finger CW-type profile. 668 721 IPR011124 GO:0008270
Pvu1g2118 1672 MobiDBLite consensus disorder prediction 228 245 - -
Pvu1g2118 1672 MobiDBLite consensus disorder prediction 1012 1027 - -
Pvu1g2118 1672 PANTHER CW-TYPE ZINC FINGER 28 1670 - -
Pvu1g2118 1672 MobiDBLite consensus disorder prediction 520 570 - -
Pvu1g2118 1672 MobiDBLite consensus disorder prediction 907 943 - -
Pvu1g2118 1672 MobiDBLite consensus disorder prediction 1214 1305 - -
Pvu1g2118 1672 MobiDBLite consensus disorder prediction 813 1092 - -
Pvu1g2118 1672 Pfam CW-type Zinc Finger 673 719 IPR011124 GO:0008270
Pvu1g2118 1672 MobiDBLite consensus disorder prediction 1321 1423 - -
Pvu1g2118 1672 MobiDBLite consensus disorder prediction 1335 1352 - -
Pvu1g2118 1672 PANTHER CW-TYPE ZINC FINGER 28 1670 - -
Pvu1g2118 1672 MobiDBLite consensus disorder prediction 1255 1305 - -
Pvu1g2118 1672 MobiDBLite consensus disorder prediction 1217 1239 - -
Pvu1g2118 1672 MobiDBLite consensus disorder prediction 478 498 - -
Pvu1g2118 1672 MobiDBLite consensus disorder prediction 1240 1254 - -
Pvu1g2118 1672 MobiDBLite consensus disorder prediction 551 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2118 Pvu-Chr1 46939322 46951028 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2118 - - gmx:100806105 2571.58