Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2109 ATGGATGTGTTGACACCATTGATTGCAGACAAGCCAGTGGTGATCTTCGGCAAGAGCACTTGTTGCATGAGCCACACAGTGACGGCTCTGATAGCCAGCTTTGGTGCCAGCCGTGCAGTTATTGAGGTGGACAAAATGGCAAGTGGAAAACAAGTAGAGAGTGCACTGGTCCAACTAGGTTGCCACCCCAGTGTGCCTGCAGTGTTCATAGGACAACAATTCATAGGTGGTGCTGATGAACTCATCAAACTCAATGTTCAAAACAAGCTTTCCCAATTGCTTCTCAAGGCTAAAGCCATATTTCTCTGGTAG 312 0.4744 MDVLTPLIADKPVVIFGKSTCCMSHTVTALIASFGASRAVIEVDKMASGKQVESALVQLGCHPSVPAVFIGQQFIGGADELIKLNVQNKLSQLLLKAKAIFLW* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2109 103 Pfam Glutaredoxin 13 75 IPR002109 -
Pvu1g2109 103 TIGRFAM GlrX-like_plant: glutaredoxin-like family 7 101 IPR011905 -
Pvu1g2109 103 SUPERFAMILY Thioredoxin-like 2 99 IPR036249 -
Pvu1g2109 103 Gene3D Glutaredoxin 3 101 - -
Pvu1g2109 103 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 103 - -
Pvu1g2109 103 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Pvu1g2109 103 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Pvu1g2109 103 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Pvu1g2109 103 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Pvu1g2109 103 CDD GRX_GRXh_1_2_like 12 93 - -
Pvu1g2109 103 PANTHER GLUTAREDOXIN 1 103 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2109 Pvu-Chr1 46885754 46886533 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2109 1 102 Miscellaneous Gene Families AT4G15700 44.118 4.93e-31 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2109 K03676 - gmx:100803979 172.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2109 1 46885754 46886533 Pvu1g2109 1 46885754 46886533 ECH
Pvu7g1703 7 39625936 39627245 Pvu1g2109 1 46885754 46886533 PCT