Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2108 ATGGACATGATCACAAGCATGGTAGCTGAAAAGCCTGTGGTGATATTCAGCAAGAGCACATGTTGCTTGAGCCACTCCATGACATCACTGATACGTAGCTTTGGAGCAAACCCTACTGTTCATGAGCTGGATGAGATGGCCAACGGCCAGCAGATTGAAAGTGCATTGCTTCAGATGGGGTGCCAACCCAGTGTTCCTGCTGTGTTCATAGGACAACGGTTCATTGGTGGCTCTAAGAAAATCATGAGCCTGCATCTCAGGAATGAACTCATACCACTTCTCATGAATGCTGGGGCTATATGGATTTGA 309 0.4725 MDMITSMVAEKPVVIFSKSTCCLSHSMTSLIRSFGANPTVHELDEMANGQQIESALLQMGCQPSVPAVFIGQRFIGGSKKIMSLHLRNELIPLLMNAGAIWI* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2108 102 PANTHER GLUTAREDOXIN 1 101 IPR011905 -
Pvu1g2108 102 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Pvu1g2108 102 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Pvu1g2108 102 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Pvu1g2108 102 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Pvu1g2108 102 Pfam Glutaredoxin 13 75 IPR002109 -
Pvu1g2108 102 TIGRFAM GlrX-like_plant: glutaredoxin-like family 5 102 IPR011905 -
Pvu1g2108 102 SUPERFAMILY Thioredoxin-like 1 101 IPR036249 -
Pvu1g2108 102 CDD GRX_GRXh_1_2_like 12 93 - -
Pvu1g2108 102 Gene3D Glutaredoxin 2 101 - -
Pvu1g2108 102 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2108 Pvu-Chr1 46879843 46880402 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2108 1 102 Miscellaneous Gene Families AT4G15690 51.961 9.86e-41 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2108 K03676 - gmx:100789514 197.978
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2108 1 46879843 46880402 Pvu7g1703 7 39625936 39627245 PCT
Pvu7g1704 7 39679045 39680928 Pvu1g2108 1 46879843 46880402 PCT