Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2107 ATGGAGGATACCCAAGAAATTGAGGAGCAGGCTCATGACAGAGTGATTTCAGACAAAACATCTGAGCCAGAGACTCGTGATGAAATTCTTTCAAGGCACAGGAAAGAGATATCGCAACTGCAGAAAAAGGAAGTTGAGATGAAAAAGGCTGCAGCTAGAGGTAGCAAGGCTGAGCAGAAAGCTAAGAAGAAGCAAGTGGAGGAAGAAGTTTCTCAACTTTCTACTAAGCTGAAGGAGAAGCATGCCAAGGAATTGGCTGCATTTGGCTATAGCAGTGGTAATGGAAATGAAAAGAGCAATTTGGACACTTTGGTTAAGGCCATAGCTGGAGTATCTGTTGCTAGTCAACCTGAACATACAAAGGTCAGCAAGGCCAAACAGAGGCGAGACAAAAGAGCTCAACAAGAAGCAGAAAGAGAGCAAAGAATCCAAGCAGAGCAGACCGACATCATAAGCGATCGAATGATTGAAAACGAGAAGTTGGAAAGGAAGTTGAAGCCTCTAGGTTTTACTGTTTGTGAAATAAAGCCTGATGGGCACTGCCTCTATAGGGCTGTTGAGGATCAGCTGGCTGTCCTCTCGGGTGGTGGATCTCCTTATACATATCAAGAACTTCGAGAAATGGTGGCTGCTTACATGAGAAAACATACATCTGATTTCCTTCCATTTTTTCTGTCAGAGAATTTAATTGAGGATGATTCTGATGAATCACTTGCTCAGAAGTTTGAAAATTACTGTAAAGAAGTGGAGTCCACAGCTATATGGGGAGGACAACTAGAGCTTGGTGCCTTAACTCACTGCTTGAAGAAGCATATTATGATATTTTCTGGATCCTTCCCAGATGTGGAGATGGGCAAAGAGTATAAATCTGATGGTGGCACTGGCTTGTCTAATTCGAGTATCATGCTTTCTTATCATAAGCATGCTTTTGGGCTAGGAGAGCACTATAATTCTGTGGTCCCAACATGA 969 0.4283 MEDTQEIEEQAHDRVISDKTSEPETRDEILSRHRKEISQLQKKEVEMKKAAARGSKAEQKAKKKQVEEEVSQLSTKLKEKHAKELAAFGYSSGNGNEKSNLDTLVKAIAGVSVASQPEHTKVSKAKQRRDKRAQQEAEREQRIQAEQTDIISDRMIENEKLERKLKPLGFTVCEIKPDGHCLYRAVEDQLAVLSGGGSPYTYQELREMVAAYMRKHTSDFLPFFLSENLIEDDSDESLAQKFENYCKEVESTAIWGGQLELGALTHCLKKHIMIFSGSFPDVEMGKEYKSDGGTGLSNSSIMLSYHKHAFGLGEHYNSVVPT* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2107 322 Coils Coil 30 83 - -
Pvu1g2107 322 PANTHER OTU DOMAIN CONTAINING PROTEIN 24 321 - -
Pvu1g2107 322 Pfam OTU-like cysteine protease 176 316 IPR003323 -
Pvu1g2107 322 MobiDBLite consensus disorder prediction 115 142 - -
Pvu1g2107 322 Gene3D - 156 321 - -
Pvu1g2107 322 ProSiteProfiles OTU domain profile. 170 322 IPR003323 -
Pvu1g2107 322 SUPERFAMILY Cysteine proteinases 146 321 IPR038765 -
Pvu1g2107 322 MobiDBLite consensus disorder prediction 7 66 - -
Pvu1g2107 322 PANTHER DEUBIQUITINASE OTUD6B 24 321 - -
Pvu1g2107 322 MobiDBLite consensus disorder prediction 1 66 - -
Pvu1g2107 322 MobiDBLite consensus disorder prediction 121 142 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2107 K18342 - gmx:100780620 533.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2107 1 46870958 46877267 Pvu1g2107 1 46870958 46877267 ECH