Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2106 ATGGATAGAGTTAAGGACTTGGCTTCAAAGAAGGCTGCTGTTATATTCACCAAGAGTTCATGTTGCATGTGTCACAGCATCAAGCAACTTTTCTATGAGCTTGGAGCAAGCCCAGCAGTTCATGAGCTTGACAATGATTCCTATGGGAGGGAAATGGAGTGGGCTTTAAGGGGTATGGGCTGTAATCCTTCAGTCCCAGCAGTGTTCATAGGTGGAAAATTTGTGGGGTCGTCCAAAGATGTCATATCCCTCCATGTTGATGGCTCTCTCAAACAATTGCTCATGGATGCAAAGGCCATCTGGTTTTAG 309 0.4531 MDRVKDLASKKAAVIFTKSSCCMCHSIKQLFYELGASPAVHELDNDSYGREMEWALRGMGCNPSVPAVFIGGKFVGSSKDVISLHVDGSLKQLLMDAKAIWF* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2106 102 SUPERFAMILY Thioredoxin-like 1 101 IPR036249 -
Pvu1g2106 102 PANTHER GLUTAREDOXIN-C1 PROTEIN 1 101 - -
Pvu1g2106 102 Gene3D Glutaredoxin 1 100 - -
Pvu1g2106 102 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 101 IPR011905 -
Pvu1g2106 102 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Pvu1g2106 102 Pfam Glutaredoxin 14 75 IPR002109 -
Pvu1g2106 102 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Pvu1g2106 102 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Pvu1g2106 102 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Pvu1g2106 102 PANTHER GLUTAREDOXIN 1 101 IPR011905 -
Pvu1g2106 102 CDD GRX_GRXh_1_2_like 12 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2106 Pvu-Chr1 46864612 46864920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2106 1 102 Miscellaneous Gene Families AT4G15700 49.020 7.67e-36 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2106 K03676 - gmx:100788094 210.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2106 1 46864612 46864920 Pvu1g2106 1 46864612 46864920 ECH
Pvu1g2106 1 46864612 46864920 Pvu7g1704 7 39679045 39680928 PCT
Pvu7g1705 7 39703513 39704203 Pvu1g2106 1 46864612 46864920 PCT