Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2105 ATGGACAAGGTGAAGAGGTTGGCCAGTGAAAACGGTGTGGTGATTTTCACAAAGAGCTCTTGTTGCCTCTGCTATGCAGTCAACATTCTGTTTGAAGAACTTGGGGTGAAACCTCAACTTCATGAGATTGATCATGACCCTGAAGGCAGAGAAATGGAGAAAGCTCTATTGAGGCTAGGCTGCAATGCTCCAGTCCCTGCTGTGTTCATCGGGGGGAAGCTAATTGGATCCACCAATGAAATCATGTCCCTCCACCTTCGAGGTTCACTCACTCCATTGTTGAAAACTCACTAG 294 0.4694 MDKVKRLASENGVVIFTKSSCCLCYAVNILFEELGVKPQLHEIDHDPEGREMEKALLRLGCNAPVPAVFIGGKLIGSTNEIMSLHLRGSLTPLLKTH* 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2105 97 CDD GRX_GRXh_1_2_like 13 93 - -
Pvu1g2105 97 ProSiteProfiles Glutaredoxin domain profile. 1 97 - -
Pvu1g2105 97 Pfam Glutaredoxin 13 75 IPR002109 -
Pvu1g2105 97 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Pvu1g2105 97 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Pvu1g2105 97 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Pvu1g2105 97 PANTHER GLUTAREDOXIN 1 96 IPR011905 -
Pvu1g2105 97 SUPERFAMILY Thioredoxin-like 1 96 IPR036249 -
Pvu1g2105 97 Gene3D Glutaredoxin 1 97 - -
Pvu1g2105 97 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 96 - -
Pvu1g2105 97 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 96 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2105 Pvu-Chr1 46861724 46862436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2105 1 95 Miscellaneous Gene Families AT4G15670 49.474 1.54e-33 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2105 K03676 - gmx:100499748 171.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2105 1 46861724 46862436 Pvu1g2105 1 46861724 46862436 ECH
Pvu1g2105 1 46861724 46862436 Pvu7g1705 7 39703513 39704203 PCT