Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2104 ATGGCTGAAGATGAGCATCAAATTGAGCTTAAGTTTCGCATATATGATGGAACTGATATAGCACACAATACCTATTCATCATCAACCACCATTGGTACCCTTAAGAAAAAGCTAATTGCTGAGTGGCCTCAAGGTAAAACGATTACACCAAAGTTAGTACGTGACCTAAAACTTATACATGCTGGTAAATTTTTGAAAAGCAACAAAACTCTGGCTGATTCCAATATAATATTTAGTGACATTCCTGGAAGTTTTGTTACGATGCACGTTGTAGTACAACCTCCAGTATCTAAACAGAAAACAGAAAAGAACCACGAGGATAAACAAAAGACTAATTCATGCGCATGCACCATTCTTTAG 360 0.3667 MAEDEHQIELKFRIYDGTDIAHNTYSSSTTIGTLKKKLIAEWPQGKTITPKLVRDLKLIHAGKFLKSNKTLADSNIIFSDIPGSFVTMHVVVQPPVSKQKTEKNHEDKQKTNSCACTIL* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2104 119 SUPERFAMILY Ubiquitin-like 5 98 IPR029071 -
Pvu1g2104 119 PANTHER MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 1 119 - -
Pvu1g2104 119 Gene3D - 1 101 - -
Pvu1g2104 119 ProSiteProfiles Ubiquitin domain profile. 8 76 IPR000626 GO:0005515
Pvu1g2104 119 Pfam Ubiquitin-2 like Rad60 SUMO-like 6 117 IPR039540 -
Pvu1g2104 119 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 1 119 IPR040015 -
Pvu1g2104 119 CDD Ubl_MUBs_plant 7 95 - -
Pvu1g2104 119 PIRSF MUB 1 119 IPR017000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2104 Pvu-Chr1 46854278 46855657 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2104 - - gmx:100818909 186.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2104 1 46854278 46855657 Pvu1g2104 1 46854278 46855657 ECH