Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2102 ATGAGCAGCCAAACCAAGACCAACGTGGATGGAGTGCACAGTGATGTCAAGGTGGTGGAGAGCCCTACTAAAGAAAGACCCTACGATCTCTTGCTGCGCTTTCTCGGCCTCTCACTCACTCTTGTTGCAACCATCGTTGTTGCTGTCGACAATGAGACCAAACTCATCTCCTACGCTGAGATGCAATTCAAAGCCACTGCTAAGTGGGAATATTTGTCTGCTATGGTGTTTTTCGTGGTGTCAAACGCAATAGCATGCTCATATGCAGCTGCATCATTGGTGATAACAGTGATGGCAAGAAACAGCAGAAGAAGAAAAAGCGATGTGACTGGTTTGGTGGTAACCGCTTTAGACGTTGTGTTGATGGCACTGTTGTTCTCAGCCAATGGTGCAGCTTGTGCAGTGGGAGTGATAGCACAGAAGGGTAACACGCACGCGCAATGGATGAAAGTGTGCGACGTCTTTGACGCCTATTGCCGCCACGTGACAGCTGCATTGGTCCTCTCCATTATTGGGTCCACGGTGTTTCTCTTGCTGGTGCTGCATTCTGTTCTCAAACTCCATTACAGATCAAGAAGCTAG 582 0.4863 MSSQTKTNVDGVHSDVKVVESPTKERPYDLLLRFLGLSLTLVATIVVAVDNETKLISYAEMQFKATAKWEYLSAMVFFVVSNAIACSYAAASLVITVMARNSRRRKSDVTGLVVTALDVVLMALLFSANGAACAVGVIAQKGNTHAQWMKVCDVFDAYCRHVTAALVLSIIGSTVFLLLVLHSVLKLHYRSRS* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2102 193 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 8 191 - -
Pvu1g2102 193 Pfam Casparian strip membrane protein domain 26 173 IPR006702 -
Pvu1g2102 193 TIGRFAM A_tha_TIGR01569: plant integral membrane protein TIGR01569 30 186 IPR006459 -
Pvu1g2102 193 PANTHER CASP-LIKE PROTEIN 1E1 8 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2102 Pvu-Chr1 46834864 46836438 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2102 - - var:108328473 326.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2102 1 46834864 46836438 Pvu1g2102 1 46834864 46836438 ECH