Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2085 ATGGAAGATCCAGCTCCACCTTCTGAAGCTTCCAATCGACCCCCTCGTAAGAGGGGCAGACCTCCCAAACACCTTCCCAAGGACCACGACGCCGACGCCCTTAACCGCGACAGGACCACCCAACACGCTCACCGAGAGAGTTCGCCCGACGATTTCGACGAGCCACGCAACAAATACAGGCGAACTCCCGCTTCGGAAGGAACCTCAAGCGTCGCGCACAAACCCTCTGACCAAACCCTAATTGAGCTGATAAAAGGAAATGGCAAGTTGATTCCTCATGCGGTCAAATTTTGGGTTGAGCGCTATGAAAAGGATCCGAAACCTGCAATGGTTGATCTCCTGACAATGCTGTTTGAGGCATGTGGAGCCAAGTATTACGATAAAAGTGATCTCGTGGATGAGACTGATGTTGATGAAGTTGTAATTGCTCTTGTCAATTGTGCTAAAAGGGGTGCAGGTGAAGATTATCAGAATTCCAAAAAGAAAGAAATTAAAAACTTCAAAGAGAATCTAGAATCATTCTGGGATAATTTGGTTCGGGAATGTCAGCATGGGCCATTGTTTGATCAAGTTTTATTTGACAAGTGCATGGACTATATCATTGCATTGTCATGCACCCCTCCAAGAGTTTACCGTCAAATTGCATCGTTGGTGGGTCTTAGGCTGGTCTCATCATTCATAACCATCGCTAATATGCTTGGTGCTCAGAGAGAGACTACTCGTAGACAGTTGGATGCTGAGAAAAAGAAAAGAACTGAGGGGCCTCGAGTTGAGTCGCTAAATAAAAGGTTTTCTGATACTCATGAGAGAATAACATTGTTGGAGGAGATGATGCGCAAGATATTTACTGGGTTATTTGTGCACCGCTACAGAGACATTGACCCAAATATTAGAATGTCATGCATTGAATCATTGGGTGCATGGATCCTTTCATACCCAACACTTTTTCTGCAGGATTTGTACTTGAAATATCTTGGATGGACGCTAAATGACAAAAATGCTGGTGTAAGAAAGTTTTCTATACACGCCCTGCAAAATCTTTATGAGGTGGATGATAATGTACCAACCCTTGGCTTATTTACTGAAAGATTTTCGGGCCGTATGATTGAGCTTGCTGATGACATTGATGTTTCTGTGGCTGTTCATGCCATAGGTCTTGTTAAGCAACTACTAAGACATCAACTTATTCCTGAAGATGACTTGGGTCCTTTGTATGATTTGTTGAATGATGAGACCCCAGAAATCAGGCATGCCATAGGAGCATTAGTGTATGATCACTTAATTGCTCAAAATACCTTCCAATCAGGATTTAAAGATGAAACTGTCGATACCTCTGAGGTCCATCTAAAGAGAATGTTGCGAATTCTGGAGGAGTTCTCCCAAGATCCTATTTTGAGTACTTACGTAATTGATGATGTGTGGGAATACATGGCCGCCATAAAGGATTGGAAGTGCATTATAACAATGCTGCTCGATGAAAATCCATCAGTAGAGCTCTCTGACAGTGATGCAACAAACTTGGTGCGGCTCCTGTGTGCATCTGTGAAGAAAGCTGTTGGAGAGAGGATTGTTCCTGCTACGGATAACAGAAAGCAATACTACAGCAAAGCCCAAAAGGATGTATTTGAAAATAACAAACAGGAAATAACTGTTGCTATGATGAAGTCATACCCATTACTCTTGCGAAAGTACATTTCAGATAAAGCAAAAGTGTCATCACTCGTTGAGATTGTTTTACATATGAACCTTGAATATTATTCCTTGAAGAGGCAGGAACAGAATTTCAAAAATTTACTCCAGCTCATGAAAGATGCATTTTTTAAGCATGGTGACAAGGACCCTCTTAGGGCTTGTATGAAGGCAATTAATTTTTGTTGCATGGAAAGTCAAGGGGAATTGCAAGATTTTGTTCGTATTAAATTAAAGGAACTTGAAGATGAAATAATTGCTAAGCTGAAATCTGCGATTAAGGAAGTAGTGGATGGTGGTGATGAGTATTCTCTTCTTGTAAACTTGAAAAGGTTGTATGAACTGCAACTGAAAAGATCTGTGCCTATTGATAGCCTGTATGAAGACATTGTCAGTGTACTACGTGGTTCTAGGAATAATATGGAGGATGAGGTTGTTGGTTTCCTGCTTCTGAACATGTATTTCCATCTGGTTTGGAGTCTACAGTCTATAACAAATGAAGAAGCTGTTTCTGGCGCATCCTTAGCTTCTCTTTTGTCTAAGCGTGATACCTTGTTGCAAGAACTTGAGTACTTTCTCAACTTGAATGCTGACAACAAGGAAGGGGGTAAACCTGGAAGTGAACTTGCTTGCAGAGTATGCATCATACTTGCAGAAACATGGTTCTTATTCAGGACAACAAATTTCAGAAAGACACAGCTGGAAACACTAGGATATCAGCCAGATGCAATTATGCTTCGGAAGTTTTGGGAACTTTGCCAACAACAGCTTAATATTTCAGATGAGGCAGAAGATGAAGATGTTAATAAAGAGTATGCTGTGGAGACAAGTAGAGATAATATGATGATTGCTGTTGGAAAGCTGATTGCTAATGATGTTGTTCCAAAGGAGGATCTTGCTTCTGAGATTATTTCTCATTTTGTGATGCATGGGACTAGTGTGACTGATATTGTAAAGTATCTGATCACAGTTTTGAAGCAAAAAGAAGTTGATTTGGCTTTCATTTTTCTGGAAGCACTTAAAAAGGAATACCATCGCCTTCTGGTCTATATCTCTGGTAGTGAAAATGGTTCTTCAGAAAACAATCCTTTATTAGGATGTAAAGATCTGGCTGCTAAGCTTTCTGGAACATTTACTGGTGCTGCCCGGATCAAATACAGGCCTGAAATTTTAAAAGTTGTCAGGGATGGCATTGAATATGCTTTTATAGATGCTCCAAAACAATTGTCATTTCTTGAAGAGGCAGTGCTTCATTTTTTGTCAAAACTCCCTGCTCCAGATTTAAATGAAATATTGAATGAGGTTCAACAAAGAGCACAAAATGTCAATACAGAGGAAAATCCCAGTGGATGGCGTCCCTTCCACACATTTATTGCCTACTTACGAGAAAAATGTGCGAAGAATGAGGGATTTCAAGATGAAAAAGAAGGGGTTTCGGTTAGGCGCAGGGGCCGGCCACGAAAGAGGCAAAACATACCAGGAAAGAAGCTTTTTGATGACCAGAGTTCAAGTGAAGACGAGGATTCCATTAGTGCATATGAACTAGATGCACAAGATGAAGGGAGAAGACAGGAGGAGGATGATGAAGATGCTCTATTGATAAATTCAATCAGATCATCATCCAAGCTAAGGTCTCTTGGAGTTTCAAGGGAGGAAAACAAAGCTCAGACAGGGAATTCTAGTAGAGCTACCGATAATTTATCTGCTTCGAGAACATCAGGCGCATCAAACTAG 3423 0.4096 MEDPAPPSEASNRPPRKRGRPPKHLPKDHDADALNRDRTTQHAHRESSPDDFDEPRNKYRRTPASEGTSSVAHKPSDQTLIELIKGNGKLIPHAVKFWVERYEKDPKPAMVDLLTMLFEACGAKYYDKSDLVDETDVDEVVIALVNCAKRGAGEDYQNSKKKEIKNFKENLESFWDNLVRECQHGPLFDQVLFDKCMDYIIALSCTPPRVYRQIASLVGLRLVSSFITIANMLGAQRETTRRQLDAEKKKRTEGPRVESLNKRFSDTHERITLLEEMMRKIFTGLFVHRYRDIDPNIRMSCIESLGAWILSYPTLFLQDLYLKYLGWTLNDKNAGVRKFSIHALQNLYEVDDNVPTLGLFTERFSGRMIELADDIDVSVAVHAIGLVKQLLRHQLIPEDDLGPLYDLLNDETPEIRHAIGALVYDHLIAQNTFQSGFKDETVDTSEVHLKRMLRILEEFSQDPILSTYVIDDVWEYMAAIKDWKCIITMLLDENPSVELSDSDATNLVRLLCASVKKAVGERIVPATDNRKQYYSKAQKDVFENNKQEITVAMMKSYPLLLRKYISDKAKVSSLVEIVLHMNLEYYSLKRQEQNFKNLLQLMKDAFFKHGDKDPLRACMKAINFCCMESQGELQDFVRIKLKELEDEIIAKLKSAIKEVVDGGDEYSLLVNLKRLYELQLKRSVPIDSLYEDIVSVLRGSRNNMEDEVVGFLLLNMYFHLVWSLQSITNEEAVSGASLASLLSKRDTLLQELEYFLNLNADNKEGGKPGSELACRVCIILAETWFLFRTTNFRKTQLETLGYQPDAIMLRKFWELCQQQLNISDEAEDEDVNKEYAVETSRDNMMIAVGKLIANDVVPKEDLASEIISHFVMHGTSVTDIVKYLITVLKQKEVDLAFIFLEALKKEYHRLLVYISGSENGSSENNPLLGCKDLAAKLSGTFTGAARIKYRPEILKVVRDGIEYAFIDAPKQLSFLEEAVLHFLSKLPAPDLNEILNEVQQRAQNVNTEENPSGWRPFHTFIAYLREKCAKNEGFQDEKEGVSVRRRGRPRKRQNIPGKKLFDDQSSSEDEDSISAYELDAQDEGRRQEEDDEDALLINSIRSSSKLRSLGVSREENKAQTGNSSRATDNLSASRTSGASN* 1141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2085 1140 Coils Coil 988 1008 - -
Pvu1g2085 1140 SMART AT_hook_2 15 27 IPR017956 GO:0003677
Pvu1g2085 1140 SMART AT_hook_2 1043 1055 IPR017956 GO:0003677
Pvu1g2085 1140 PANTHER LD34181P-RELATED 23 1105 - -
Pvu1g2085 1140 MobiDBLite consensus disorder prediction 1097 1140 - -
Pvu1g2085 1140 MobiDBLite consensus disorder prediction 24 61 - -
Pvu1g2085 1140 ProSiteProfiles Stromalin conservative (SCD) domain profile. 286 371 IPR020839 -
Pvu1g2085 1140 MobiDBLite consensus disorder prediction 1 74 - -
Pvu1g2085 1140 Gene3D - 257 581 IPR011989 -
Pvu1g2085 1140 SUPERFAMILY ARM repeat 250 647 IPR016024 -
Pvu1g2085 1140 MobiDBLite consensus disorder prediction 1035 1140 - -
Pvu1g2085 1140 PANTHER STROMAL ANTIGEN 23 1105 IPR039662 -
Pvu1g2085 1140 Pfam STAG domain 155 262 IPR013721 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2085 K06671 - gmx:100810550 1850.48