Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2084 ATGATGCTCAGACTTCGAAGCCGCGACGGCCTGGAGCGAGTCATGGTCGAAAACCCGCACGCCACCACAGTGTTGGGGCTGAAGCGGCTTATCGAAGCCCAATTGAGAATTCCGGTTCAGAACCAAACCCTCTCCACCAACCAGAACCTTCTACTGGCGAAATCGCGTGAAGATCTCCATCGATTCACCGATATGGCCAATCCCGATGTCACTCTCTCGTCTCTCAACCTCGCTCACGGCTCCATCGTCTTTTTGACCTACGAAGGCGAGCGCCACGTGGCGGGCCCCGCCTTCAACCCCGCGGGATCCTTCGGCCGCAAGATGACCATGGACGACCTCATCGCCAAGCAGATGCGCGTCACGCGCCAGGAGAATCCGCACTGCGAGCTCGTGTCGTTCGACCGCGATTGCGCTAACGCGTTCCAGCACTACGTCAACGACACGCTCGCGTTCGCGGTCAAGCGCGGCGGCTTCATGTACGGCAACGTTTCCGAGGAGGGGAAGGTCGAGGTGGACTTCATCTACGAGCCGCCGCAGCAGGGGTCAGAGGAGAATCTCTTGTTTTTCAGGGACCCCGAAGAGGAGAAACTCGTGGAGGCTATTGCGGCGGGGTTGGGGATGAGGAGGGTAGGGTTCATTTTCACGCAGACGATAAGCCAGGACAAGAAGGATTATACTTTGTCGAATAGGGAGGTACTTCAGGCTGCGGAGTACCATGCTGAGAGTGGGTTGAAAGAGTGGGTTACTGCGGTTGTTAAGCTTGAGGTGAATGAAGATATGAGTGCCGATGTGCATTTTGAAGCGTTTCAGATTAGTGATGTGTGCGTGAGATTGTTCAAGGAAGGGTGGTTTGAGACTGAGATAAAGGAGGACGATGATCCCAAGTTGTCTAAGATGAAGAAGGATGTGGTTGTTGGGGTTAAGGATACCAAAGAAGTTGACAATGATTTCTTCTTGGTCGTCGTCAAAATCTCAGATCATCAGGGTCCTCTTTCATCAACATTTCCCGTTGAGAACCGGAACACACAGATGACTGTGAAGGCTTTGAAGAATCATCTGGACAGGACGAAAAGTCTTCCATTTGTGAAGCGAATTTCTGATTTTCATCTTCTTCTTGTACTGGCAAGGGTTTTAGACGTAAATGCTGATGTTCCTGCATTGACGGAATGTGTGCAGACACAGACTTCTGTACCAGAAGGTTACCAGATCCTTATTGAGTCAATGGCAAGCACTGCTTGA 1239 0.519 MMLRLRSRDGLERVMVENPHATTVLGLKRLIEAQLRIPVQNQTLSTNQNLLLAKSREDLHRFTDMANPDVTLSSLNLAHGSIVFLTYEGERHVAGPAFNPAGSFGRKMTMDDLIAKQMRVTRQENPHCELVSFDRDCANAFQHYVNDTLAFAVKRGGFMYGNVSEEGKVEVDFIYEPPQQGSEENLLFFRDPEEEKLVEAIAAGLGMRRVGFIFTQTISQDKKDYTLSNREVLQAAEYHAESGLKEWVTAVVKLEVNEDMSADVHFEAFQISDVCVRLFKEGWFETEIKEDDDPKLSKMKKDVVVGVKDTKEVDNDFFLVVVKISDHQGPLSSTFPVENRNTQMTVKALKNHLDRTKSLPFVKRISDFHLLLVLARVLDVNADVPALTECVQTQTSVPEGYQILIESMASTA* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2084 412 Pfam NPL4 family 157 283 IPR007717 -
Pvu1g2084 412 CDD Ubl_AtNPL4_like 1 86 - -
Pvu1g2084 412 SUPERFAMILY Ubiquitin-like 1 90 IPR029071 -
Pvu1g2084 412 Gene3D - 1 101 - -
Pvu1g2084 412 ProSiteProfiles MPN domain profile. 130 271 IPR037518 -
Pvu1g2084 412 PANTHER NUCLEAR PROTEIN LOCALIZATION 4 2 92 IPR016563 GO:0006511
Pvu1g2084 412 PANTHER NUCLEAR PROTEIN LOCALIZATION 4 102 410 IPR016563 GO:0006511
Pvu1g2084 412 CDD MPN_NPL4 119 374 IPR007717 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2084 K14015 - gmx:100811623 729.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2084 1 46658119 46661596 Pvu1g2084 1 46658119 46661596 ECH