Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2079 ATGAACAAAAATGGTGTCATTCCGTGGATGAAGCAGCAATGGCGGGGAATAGTGAAAGTGCGTTTGAAATGGGTGAAGAACCGAAGCCTCGACCACGTCATCGACAAGGAAACCGATCTCAAAGCGGCCTGCCTCCTGAAGGACGCCATTAACCGCTCCTCCACCGCCTTCCTCACGGCGAAATCCGTGGCAGACTGGCAGAAGCTTCTCGGCCTCACCGTCCCTGTCCTCCGCTTCCTCCGCCGCTACCCCACCCTCTTCCACGAGTTCCCGCACCCGCGCTGGCCCTCCCTCTCCTGTTTCCGCCTTACCGATACTGCACTATTCCTACACTCCCAGGAACTCGCCCTCCACCAAACTCACCAAAACGAAGCCGTCAAACGCCTCTCCAAGCTTCTCATGATGACCCGCTCACGCGCCCTATCCCTGTACTCCCTCCAATCGCTCAAGTGGGACCTCGGCTTACCTGACTCCTTCGAGAAAACCCTCGTCCCCAACTTCCCTAACGACTTCGAATTCGTCAAGTCCCCCAACGGCGTCGTTTCGCTCAAACTAGCACGATGGCCGGAGGAATTCGCTGTTTCCGCGCTGCAGGAGAGAAATGAGTGTGGGAGCCACTACCGGGAATTCAAGAGGGGACAATCGGCGTTGGCTTTTCCGATGAGGTTTCCGAGGGGGTACGGGGCGCAGAAGAAGGTGAAGACGTGGATGGAGGAGTTTCAGAAGCTGCCTTATGTTTCCCCCTATGCTGATTCCTCCAAGATTGATCCCAACAGCGATTTGATGGAGAAGCGCGTGGTCGGGGTTCTCCACGAGCTTTTGAGTTTGACTCTGCACAAGAAAACCAAGAGGAACTACTTGAGGAGCTTGAGGGAAGAGTTGAATCTTCCGCACAAGTTTACCCGGATTTTCACCAGGTATCCCGGCATTTTTTACCTCTCATTGAAGTGTAAAACGACCACTATTACTCTCAGGGAAGGGTACCAGAGTGGGAAACTGGTTGACCCGCACCCTCTTGTTCGACACAGAGATAAGTTCTACCGTGTCATGCAGACGGGGCTTCTTTATCGTGGGGATGGGTCATTGAAACACGAGGACAACAGTTCGTTGGTCCAGAATGATGAGCTAAGAAGTGAGGAATCGGAGGAGGAAGAGATTGAAACGAGTGATGAACTCTGTGAGGGTGAATGGAGTGATGAACTCTGCGAGGGTGAAGCGAGTGAATAA 1227 0.5355 MNKNGVIPWMKQQWRGIVKVRLKWVKNRSLDHVIDKETDLKAACLLKDAINRSSTAFLTAKSVADWQKLLGLTVPVLRFLRRYPTLFHEFPHPRWPSLSCFRLTDTALFLHSQELALHQTHQNEAVKRLSKLLMMTRSRALSLYSLQSLKWDLGLPDSFEKTLVPNFPNDFEFVKSPNGVVSLKLARWPEEFAVSALQERNECGSHYREFKRGQSALAFPMRFPRGYGAQKKVKTWMEEFQKLPYVSPYADSSKIDPNSDLMEKRVVGVLHELLSLTLHKKTKRNYLRSLREELNLPHKFTRIFTRYPGIFYLSLKCKTTTITLREGYQSGKLVDPHPLVRHRDKFYRVMQTGLLYRGDGSLKHEDNSSLVQNDELRSEESEEEEIETSDELCEGEWSDELCEGEASE* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2079 408 MobiDBLite consensus disorder prediction 377 408 - -
Pvu1g2079 408 Pfam Plant organelle RNA recognition domain 25 353 IPR021099 GO:0003723
Pvu1g2079 408 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 10 403 IPR045040 GO:0003723
Pvu1g2079 408 MobiDBLite consensus disorder prediction 365 408 - -
Pvu1g2079 408 PANTHER OS04G0546100 PROTEIN 10 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2079 Pvu-Chr1 46625280 46628073 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2079 - - vun:114164383 777.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2079 1 46625280 46628073 Pvu1g2079 1 46625280 46628073 ECH
Pvu1g2079 1 46625280 46628073 Pvu7g1748 7 40269261 40271468 PCT