Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2075 ATGGCGGTTTCCGAAGAGGAATGCTCTTCGGCGAAGTCTGGCTCTTCTTCTTTTTCCTCCGCCTCGCGCTACTACCTCTCCAAATGCGTCCTCAGAGGAAGCGTCGTTCTTCAGGTCCTCTACGCTCACATCCGTTCTCCCTCCTCAAATGACATCGTTTTTGGCAAGGAGACGTCTATTGAATTGGTGGTCATTGAAGATGATGGGAATGTGCAATCTGTGTGTGATCAGCCGGTCTTTGGCACCATCAAAGATCTTGCCATATTGCCTTGGAATGAGAAGTTTCGTGCACGTGATCCTCAGCTGTGGGGTAAAGACCTTTTGGTTGCTACATCCGATTCTGGGAAGCTTTCCTTGCTCACGTTTTGCAATGAAATGCACAGGTTTGTTTCTGTAACACATATACAGATGTCTAATCCTGGAAACCCGATGGATCTTCCTGGAAGAAAGCTAGCAGTTGATTCCAGTGGTTGTTTTATTGCTTCCAGTGCATATGAAGATCGGCTGGCCTTGTTTTCTATGTCAATGTCCAGTGGTGATATCATTGATGAGAGAATTGTATATCCTTCTGAAAGTGATGGAACTGCAAGTTCTTCAAGAAGCATCCACAGAACCAATATCCGTGGTACTATTTGGAGCATCTGCTTCATTTCACAACCTAGCAAGGAGCATAATCCTGTACTAGCTGTTATTATAAATAGGAGGGGAGCCCTTCAAAATGAATTGCTATTATTGGAATGGAATGTTAAAGCACACAAAATATTTGTTATTTCTCAATATGCCGAGGCTGGGCCTCTAGCATATGACATTGTTGAAGTTCCTAACTCCAGGGGACTTGCATTTCTGTTCAGGACTGGGGATGTTCTCTTAATGGATCTTAGAGATCATCACAACCCATCCTGTGTTTATAAGACTAACTTGAACATTTTACCAAATGCCATGGAAGAGCAGACTTATGTGGAAGACTCATGTAAATTACACGATGTTGACGATGAACGCTTTAATGTTGCTGCCTGTGCTTTGTTGGAGCTGAGTGATTACGATCCCATGTGTATAGACAGTGACAATGGTGGTGCTAATTCAGGTTACAAATACATATGCTCATGGAGTTGGGAACCTGAAAATAATAGAGATCCTAGGATGATTTTCTGTGTAGATACTGGGGAATTTTTTATGATTGAAGTTCTTTTTGATTCTGAAGGCCCTAAAGTTAATCTGTCTGAGTGTCTCTATAAAGGTCTGCCGTGTAAAGCACTTTTGTGGGTTGAAGGTGGATATGTAGCTGCGCTTGTGGAAATGGGGGATGGTGTGGTCCTGAAACTGGAAGATGGAAGGCTATGCTATACAAACCCTATTCAAAACATTGCACCAATCTTGGATATGGCAGTTGTAGATTATCGTGATGAGAAGCATGATCAAATGTTTGCTTGCTGTGGTGTGGCTCCAGAGGGGTCATTAAGGATAATTCGAAATGGTATTAATGTGGAAAATCTACTCAGGACTGCTTCTATATATCAGGGGGTAACTGGTACTTGGACTGTCAGAATGAAAGTTACTGATTCACATCATTCTTTTCTAGTTCTATCATTTGTTGAGGAAACCAGAATATTGTCAGTTGGCTTAAGTTTTACTGATGTGACTGATTCAGTTGGTTTTGAACCTAATGTCTGCACTTTGGCATGTGGCCTTGTGACTGATGGTGTACTTGTTCAGATCCACCGATATACTGTTAAGCTTTGTTTGCCCACTAAAGCTGCTCATTCTGAAGGTATCCCTTTGTCCTCTCCTATTTCCACATCTTGGTCTCCAGATAATGTGAGTATCAGTTTGGGGGCAGTTGGGCATAATTTCGTAGTTGTGTCAACCTCTAACCCGTGCTTTCTGTTTATCCTTGGGGTTAGATTCCTATCATCTTATGAATATGAAATTTATGAAATGCAACATTTGGTACTGCAGAATGAATTATCATGTATTTCCATCCCTGGACAAGAAATTGAGCAAAAACCATCAAATTCATCCATTTCATCAAATAATAGTAGCATGTCTTCTTTCCAAAGTGGAGTAGACATCAATAAAACCTTTGTTATCGGTACACACAGGCCTTCTGTGGAAATTTGGTTTTTTTCACCAGGTGGAGGAATTACAGTAGTTGCTTGTGGGACAATTTCATTGACTAATACAATAGGGACTGCCATAAGTGGTTGTGTACCTCAAGATGTACGGCTTGTATTTGTTGATAAGTATTATGTTGTTGCTGGATTAAGGAATGGAATGCTCCTTCGCTTTGAGTGGCCGGTGGAACCATGTCCTTCATCACCCATAAATATGGTGGATACTGCTTTATCTTCTATAAATTTGGTAAATTCTGCAAGTAATGCTTTTGACATGAGAAATGACCTTCCTTTAACACTTCAATTGATTGCTATTCGGCGCATTGGCATTACTCCCGTTTTCTTGGTGCCACTAGGTGACACACTGGATGCTGATATAATTGCTCTTAGTGATAGGCCTTGGTTGTTGCATAGTGCAAGACATAGCCTTTCGTATACTTCTATCTCATTTCAACCTTCCACACATGTAACTCCTGTTTGCTCTGTTGAGTGTCCAAAAGGAATATTGTTTGTTGCAGAAAACTGTTTACATCTGGTGGAAATGGTTCACAGCAAGAGACTTAATATGCAGAAGTTTCATTTAGAGGGCACTCCTAGGAAGGTCCTGTATCACGATGAAAGCAAAATGTTGCTTGTTATGAGGACTGAACTGAATTGTGGTACATGTTTGTCTGACATATGTTGTGTGGATCCCCTAAGTGGGTCAGTACTGTCGTCTTTTAGACTCGAACTTGGAGAAACAGGAAAATCCATGGAATTAGTAAGAGTTGGAAGTGAGCAAGTGCTTATTGTTGGAACTAGTCTGTCTTCTGGTCCAGCTGTAATGCCCAGTGGTGAAGCTGAAAGTTGCAAGGGTCGTCTTCTTGTTCTTTGTCTTGTTCATGTGCAAAATTCAGATAGTGGTTCAATGACATTCTGTTCAAAGGCAGGGTCATCATCTCAAAAAACTTCGCCATTCCATGAAATTGTTTCATATGCTCCTGAACAGTTATCGAGCAGCAGCCTTGGCAGCAGTCCCGATGATAATAGTTCTGATGGCATCAAACTTGATGAAAATGAAGTATGGCAGTTCCGATTGGCTTATGCAAGAAAATGGCAAGGAGTGGTTTTTAAAATCTGTCCTTATCTTGATCGTTACTTCTTGGCATCTGCTGGCAATACTTTCTATGTTTGTGGTTTCCTTAATGACAATCCTCAAAGAGTGAGAAGGTATGCTATGGGAAGGACGCACCACATGATAACATCTTTGAGTGCACATTTTACAAGAATTGCAGTTGGTGATTGTCGTGATGGAATCATTTTATTTTCTTATCACGAGGAATCTAGAAAATTGGAGCAACTTTGCTGTGATCCATCACGAAGGTTAGTTGCTGATTGCATTTTGATGGATGCTGATACGGCTGTTGTTTCGGATCGTAAAGGGGGCATTGCTATTTTATGTTCAAATCATTTGGAAGACAACGCAAGTACTGAATGCAACATGACACTAAGCTGTGCTTATTTCATGGCCGAGATAGCCTTGAGCGTCCAGAAGGGTTCATATTCATACAGACTTCCAGCTGATGATGTTTTGCAAGGCGGCAATGGCCCCAAGACAAATGTTGATTCACTACAAAATACTATTATTGCCAGTACCCTGTTAGGAAGCATAATGATCTTCATCCCTTTATCAAGGGAAGAATATGAGCTATTAGAAGCAGTGCAAGAAAGACTTGTTGTCCATCAGTTGACTGCGCCTGTTCTAGGAAATGATCATAATGAGTTTCGCAGTCGTGAAACTCGGGGTGGAGTACCCAAGATACTTGACGGTGACGTGTTAACCCAGTTTTTGGAGCTGACAAGTATGCAGCAAAAGATGATTTTGTCTTCCGAGCCACCTGATATAGCAAAACCAAGTTTGAAGCCACTCCTATCCCCCCATGTTTCTGTAAATCAGGTGGTTCAACTTCTTGAACGAGTTCATTATGCTCTGAACTAA 4089 0.4133 MAVSEEECSSAKSGSSSFSSASRYYLSKCVLRGSVVLQVLYAHIRSPSSNDIVFGKETSIELVVIEDDGNVQSVCDQPVFGTIKDLAILPWNEKFRARDPQLWGKDLLVATSDSGKLSLLTFCNEMHRFVSVTHIQMSNPGNPMDLPGRKLAVDSSGCFIASSAYEDRLALFSMSMSSGDIIDERIVYPSESDGTASSSRSIHRTNIRGTIWSICFISQPSKEHNPVLAVIINRRGALQNELLLLEWNVKAHKIFVISQYAEAGPLAYDIVEVPNSRGLAFLFRTGDVLLMDLRDHHNPSCVYKTNLNILPNAMEEQTYVEDSCKLHDVDDERFNVAACALLELSDYDPMCIDSDNGGANSGYKYICSWSWEPENNRDPRMIFCVDTGEFFMIEVLFDSEGPKVNLSECLYKGLPCKALLWVEGGYVAALVEMGDGVVLKLEDGRLCYTNPIQNIAPILDMAVVDYRDEKHDQMFACCGVAPEGSLRIIRNGINVENLLRTASIYQGVTGTWTVRMKVTDSHHSFLVLSFVEETRILSVGLSFTDVTDSVGFEPNVCTLACGLVTDGVLVQIHRYTVKLCLPTKAAHSEGIPLSSPISTSWSPDNVSISLGAVGHNFVVVSTSNPCFLFILGVRFLSSYEYEIYEMQHLVLQNELSCISIPGQEIEQKPSNSSISSNNSSMSSFQSGVDINKTFVIGTHRPSVEIWFFSPGGGITVVACGTISLTNTIGTAISGCVPQDVRLVFVDKYYVVAGLRNGMLLRFEWPVEPCPSSPINMVDTALSSINLVNSASNAFDMRNDLPLTLQLIAIRRIGITPVFLVPLGDTLDADIIALSDRPWLLHSARHSLSYTSISFQPSTHVTPVCSVECPKGILFVAENCLHLVEMVHSKRLNMQKFHLEGTPRKVLYHDESKMLLVMRTELNCGTCLSDICCVDPLSGSVLSSFRLELGETGKSMELVRVGSEQVLIVGTSLSSGPAVMPSGEAESCKGRLLVLCLVHVQNSDSGSMTFCSKAGSSSQKTSPFHEIVSYAPEQLSSSSLGSSPDDNSSDGIKLDENEVWQFRLAYARKWQGVVFKICPYLDRYFLASAGNTFYVCGFLNDNPQRVRRYAMGRTHHMITSLSAHFTRIAVGDCRDGIILFSYHEESRKLEQLCCDPSRRLVADCILMDADTAVVSDRKGGIAILCSNHLEDNASTECNMTLSCAYFMAEIALSVQKGSYSYRLPADDVLQGGNGPKTNVDSLQNTIIASTLLGSIMIFIPLSREEYELLEAVQERLVVHQLTAPVLGNDHNEFRSRETRGGVPKILDGDVLTQFLELTSMQQKMILSSEPPDIAKPSLKPLLSPHVSVNQVVQLLERVHYALN* 1363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2075 1362 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR (CPSF) A SUBUNIT PROTEIN 19 1359 - -
Pvu1g2075 1362 Pfam Mono-functional DNA-alkylating methyl methanesulfonate N-term 106 660 IPR018846 -
Pvu1g2075 1362 Pfam CPSF A subunit region 1060 1315 IPR004871 GO:0003676|GO:0005634
Pvu1g2075 1362 PANTHER DNA REPAIR/RNA PROCESSING CPSF FAMILY 19 1359 - -
Pvu1g2075 1362 Gene3D - 499 890 IPR015943 GO:0005515
Pvu1g2075 1362 Gene3D - 35 453 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2075 Pvu-Chr1 46580052 46595208 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2075 K12830 - gmx:100806799 2408.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2075 1 46580052 46595208 Pvu1g2075 1 46580052 46595208 ECH