Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2063 ATGTCAAATTTCTCGTCATGGCTCTTTCGCTTACGTTCTTCTTCCTCCAAGTTCTTCTACCGCTACCGCACTCTCCACAATAAATACGCACCCACCGTCTTCAACAACCATTCTACCAGGAACGCAAGCTTAACCTCTCTGCTTCCTCTCGCTCTCGCTCTTTCCGCTGGATCACTCGCTCTTCATCCACACTTCAGTCCTTCCTTCTGCGACACCGAGAGAGGTGTGAACATTGGGGGCAAAGGTAGCACGCAATTCGTTGTTAAGGGATCACACAAGGAATTTCCGCAGGAGCTTCTTGAGGAGTTGAAAATCATCTGTCAGGATAACATATCTGTTGATTATGACGAAAGATATATCCATGGAAAACCACAAAACAGCTTTCACAAGGCTGTTAATATCCCAGATGTGATTGTTTATCCGAGATCTGAAGAGGAGGTATCTAAGATTGTCAGTTTATGTAACATGCATAAGGTTCCTATTGTACCATATGGTGGAGCTACATCAATCGAGGGTCACACCTTATCCCCTCATGGAGGGGTTTGCATTGACATGTCATTAATGAAAACAGTGAAAGCATTACATGTTGATGACATGGATGTTGTTGTTGAGCCTGGCATTGGATGGATGGAGCTTAATGAGTATTTGGAACCTTATGGACTATTTTTTCCACTTGATCCAGGTCCTGGTGCTAGCATTGGAGGCATGTGTGCTACACGTTGCTCTGGTTCATTAGCTGTAAGGTATGGAACTATGCGTGATAATGTCATCAGTCTCAAGGTGGTTCTTGCCAACGGAGACATTGTGAAGACTGCATCACGGGCCAGGAAGAGTGCTGCAGGGTATGACTTGACCCGCTTGATGATTGGAAGTGAAGGAACACTTGGTCTTATAACAGAAGTGACCCTGCGGCTTCAGAAAATTCCTCAGCATTCAGTGGTTGCAATGTGCAATTTTCCTTCTGTGAAGGATGCAGCAGATGTTGCTATTGCCACAATGAGGTCTGGTGTACAGGTGTCAAGGGTAGAGCTATTGGATGAAGTTCAAGTGAAAGCTATCAATATTGCTAATGGGAAAAATTTACCTGAATGTCCAACCTTAATGTTTGAATTTATAGGAACAGAGGCATATGCACGTGAGCAAACTCAAATTGTTCGGAAACTTGTTTCTGAGCACAATGGCTCAGATTTTGTATTTGCAGAAGAACCTGAAGCAAAAAAAGAACTTTGGAAGGTACGGAAAGAGGCACTCTGGGCTTGCTTTGCAATGGAACCTAATCTGGAGGCAATGATTTCAGATGTATGTGTTCCTTTATCTCACCTTGGTGATTTAATTTCAAGGTCTAAAAAGGAGCTGGATGCATCACCACTAGTTTGCACAGTAATTGCTCATGCTGGTGATGGTAATTTCCACACGGTTATTCTATTTGATCCTAGCCAAGAAGAACAGCGGCGGGAGGCAGAGAGACTCAACCAATTTATGGTTTATGCTGCCTTGTCATTCGAAGGAACTTGTACTGGTGAACACGGTGTTGGCACTGGAAAAATGAAGTATCTTGAAGAAGAACTCGGAGTGGAAGCATTGAGGACAATGAAAAAAATAAAATCAGTCCTGGATCCCAACAATATCATGAATCCAGGAAAGCTCATTCCTCCCCATATTTGTTTCTAG 1671 0.4339 MSNFSSWLFRLRSSSSKFFYRYRTLHNKYAPTVFNNHSTRNASLTSLLPLALALSAGSLALHPHFSPSFCDTERGVNIGGKGSTQFVVKGSHKEFPQELLEELKIICQDNISVDYDERYIHGKPQNSFHKAVNIPDVIVYPRSEEEVSKIVSLCNMHKVPIVPYGGATSIEGHTLSPHGGVCIDMSLMKTVKALHVDDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGPGASIGGMCATRCSGSLAVRYGTMRDNVISLKVVLANGDIVKTASRARKSAAGYDLTRLMIGSEGTLGLITEVTLRLQKIPQHSVVAMCNFPSVKDAADVAIATMRSGVQVSRVELLDEVQVKAINIANGKNLPECPTLMFEFIGTEAYAREQTQIVRKLVSEHNGSDFVFAEEPEAKKELWKVRKEALWACFAMEPNLEAMISDVCVPLSHLGDLISRSKKELDASPLVCTVIAHAGDGNFHTVILFDPSQEEQRREAERLNQFMVYAALSFEGTCTGEHGVGTGKMKYLEEELGVEALRTMKKIKSVLDPNNIMNPGKLIPPHICF* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2063 556 Gene3D - 510 550 IPR016171 -
Pvu1g2063 556 Gene3D - 428 509 - -
Pvu1g2063 556 SUPERFAMILY FAD-binding/transporter-associated domain-like 99 309 IPR036318 GO:0050660
Pvu1g2063 556 Pfam FAD linked oxidases, C-terminal domain 308 549 IPR004113 GO:0003824|GO:0050660
Pvu1g2063 556 PANTHER D-LACTATE DEHYDROGENASE, MITOCHONDRIAL-RELATED 68 552 - -
Pvu1g2063 556 SUPERFAMILY FAD-linked oxidases, C-terminal domain 313 552 IPR016164 GO:0003824|GO:0050660
Pvu1g2063 556 PANTHER D-LACTATE DEHYDROGENASE 68 552 - -
Pvu1g2063 556 Gene3D - 93 328 IPR016169 -
Pvu1g2063 556 ProSiteProfiles PCMH-type FAD-binding domain profile. 131 308 IPR016166 GO:0071949
Pvu1g2063 556 Pfam FAD binding domain 135 271 IPR006094 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2063 Pvu-Chr1 46490909 46501379 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2063 K00102 - gmx:100803612 981.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2063 1 46490909 46501379 Pvu1g2063 1 46490909 46501379 ECH