Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2061 ATGGATTTGGAATCTTCTGGGGATTCGGTGAAATGTTGCAAGCACTGCGAATGTGGGTGTATTGATTGCTCCATGGCAGCTCGATCTTCAGGGAATTGGTCCCGTTCTGTGAAAAGAAAACACAAGGAGTTTGAACGGGGCGGGCAAATCTGTGTGGCGGGGCTGGATTGCGATCCAGTGGCGCGTGTCGAGATTGGAAATGAATGTGAAGCCTTACGGGAGGCTGTGAGCAGCCAACAACAATCAATACAGGATTTGTATGCTGAATTGGAGGAGGAGAGGAGTGCTGCCTCCTCGGCCGCCAATGAGACCATGTCAATGATATTGAGATTGCAGAGGGAGAAGGCGGAGCTTCAGATGGAAGCGCGGCAGTTCAAGAGATTTGTTGAGGAGAGGACGGTTTACGATCAGCAGGAAGTTTTATTGTTGGAGGATATGTTGTATAAGAGGGAACAGGCAATTCACTCGCTCACCTGTGAGGTACAGGCTTATAAGCACAGGTTGTTGAGTTTTGGCCTCACTGAATCCGAGGCAGAAGGTGATCAGGATGAATTTCCCCCTTATGATTACCCTCCTTTGAGATGTAAGGCAATGCATGCTTGTGCTGATACAGACATTGATGACATAGACATTGATAAATATGCTTTTGGAGAAACTCCGAAGGACCGATTGAGGAACTTAGAAAGTAGGATATCTCAAATGGAGAGAAGCCCCACTTATAGCCAGGTAGATGGGGAATTCAGTGGAAAAAATATTCTAGAGAAGGTGATAGTTGGACAGTCTCCAAGATGGACTAAACATTCCAGGAAATTTTCTTGTGATTCATCTTCACTGTGTCCTGAGTATATGATGGATTCTCCCAGCTTTAGGAAGATGGATTGTCTCTCAGAATCAGGGGACCTTCCCAACTTGAAGAAGATGGATAATGTATCAGAAGCTGGTGATGATATCATTGATAAAGTCTATACAATTGACTCAGAGTTCAAAACTGGAGTTAGTGTTTGCGATGATTATGCAGGCACTCCAAGGGACTTTGTTAATAATGCGGATTTTGAAGATCCATACGTAAAGAAGCTTTGCATGAGGCTTCAAGCACTTGAGGCTGATAGGGAATCAATGAGGCAGGCAATCATTTCAATGCGCACTGATAAAGCACAGCTTGTTTTACTGAGAGAAATCGCTCAAGAATTGTGCAAGGAGATGTCAGAGCAAAAAAGAATGACAGCAAGGTCCTTTATTAGCAGCTTCTCATTCTTGACAGTTTTCAAGTGGATTGCATCAATTGTTTTCTGGAGAAAGGAAGCTCATAAAATCAAGTACATGTTCGGGCTACCGTCTGACAGCGTGGGCTTGCTAATGCTGCTTGACAAAGGACCCCATGTAAGGTCATGGAGATATCTTCAAAGTACACAAGTGGGAGAGTAG 1425 0.4442 MDLESSGDSVKCCKHCECGCIDCSMAARSSGNWSRSVKRKHKEFERGGQICVAGLDCDPVARVEIGNECEALREAVSSQQQSIQDLYAELEEERSAASSAANETMSMILRLQREKAELQMEARQFKRFVEERTVYDQQEVLLLEDMLYKREQAIHSLTCEVQAYKHRLLSFGLTESEAEGDQDEFPPYDYPPLRCKAMHACADTDIDDIDIDKYAFGETPKDRLRNLESRISQMERSPTYSQVDGEFSGKNILEKVIVGQSPRWTKHSRKFSCDSSSLCPEYMMDSPSFRKMDCLSESGDLPNLKKMDNVSEAGDDIIDKVYTIDSEFKTGVSVCDDYAGTPRDFVNNADFEDPYVKKLCMRLQALEADRESMRQAIISMRTDKAQLVLLREIAQELCKEMSEQKRMTARSFISSFSFLTVFKWIASIVFWRKEAHKIKYMFGLPSDSVGLLMLLDKGPHVRSWRYLQSTQVGE* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2061 474 Coils Coil 356 383 - -
Pvu1g2061 474 PANTHER BNAANNG28530D PROTEIN 1 449 - -
Pvu1g2061 474 Pfam Zein-binding 71 161 IPR007656 -
Pvu1g2061 474 Coils Coil 69 128 - -
Pvu1g2061 474 PANTHER ZEIN-BINDING DOMAIN-CONTAINING PROTEIN-RELATED 1 449 - -
Pvu1g2061 474 ProSiteProfiles GTD-binding domain profile. 67 165 IPR007656 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2061 Pvu-Chr1 46473472 46476679 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2061 - - pvu:PHAVU_001G198800g 932.169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2061 1 46473472 46476679 Pvu1g2061 1 46473472 46476679 ECH
Pvu1g2061 1 46473472 46476679 Pvu7g2730 7 50266192 50269906 PCT