Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2051 ATGGAATCTGAAAACGGGATTGCTGTGGAGGAAGAGAAACGTGTCATCGGGGTAACAACCAAGGTGGAGAATATAAAGAAAGAAGAGGAAAAGGACTGTAACGGTGCAGAGATTCAGACAAAGAATGAAGTATCTAAACCCATGGTGGAGGCTAAAGACCCCATTTCTGCTGCTGTTGAAGCCTCCAAAACTTCTTCTGCAAATAAAAACTCAAAAGGTGCTACTAAGGAAACTGGTGGTAGAGCAAGTGTTGCTTCCAAGAGCAAAAAATATGCCAAAGATAATTTGAAGAGTCTAATCTCAATATCTCAAAAACAAAGGCCATCCCTTTCCCAGAGCATTTCTTTCCCAGCCAAATCATCTGGTGAAGATGTTATGCAGAAAAGCTTTAATGGGTATATTGTGAAGACAAAAGTTAAACACGTTCAAGGTAATAATGGGATTAGAGGTGAGGCCCCCGTTCGTGATTTAAACAAGTCCACAAACTCTGGAGTGAACTCACTCGCAAAAACCATTGCTGGCATGTCTGGTTTGAAACGCTCTGCGTTTGGAAGGACTACTCCTGTTTCTCCAGCCACCAAGAGCCAAATTTCTGAGGCATCGTTACTTGATGACCATGTGTCAAACACAGCAAAAACTGCAAAAGCAAATAAGGATGATGATGATTGTCACTCCACAACTTCAAGTGCTACTCCTCGTCTGAGAAGCAGTGGAACTGGATTTTCCTTTCGATTGGAAGAAAGAGCTGAAAAGCGGAAGGAGTTTTTCTCTAAGTTGGAGGAAAAAACTATAGCCAAGGAAGCAGAGAAAACTAACCTACAAGCAAAATCAAAGGAAAATCAAGAGGCAGAGATCAAGCTATTGAGGAAGAGCCTGACATTCAAAGCCACTCCAATGCCAAATTTCTACAAGGAACCACCTCCAAAAGTTGAGCTGAAGAAGATACCAACAACACGCCCAAAATCCCCAAAGCTTGGAAGGCACAAAGAACCTGCAGTGAACAACAATTCAGGAGAAGATAAGTCTTGCTCCAGTCCAGGTGGGAAACAACAGCAGAATGATTCAAACAAGGGTAATAAGGGTCATAAGGATGTGATTTCAAAGAAACCAATCCAAAAAAACCAGGCCAAACTGAAGTCTGAGAAAAACAAAGAATTCCAAGTTCCACATGATAACAATTCTGAAAGCAAAAATGAGATGGAGTTACAATCTGAACCATCAAATAGTCCACTGCTTCTAAATTCGACTACATCGGAGCCTGTGTCATCATATGAGGTTATTGTTGGAGTGTAG 1293 0.4145 MESENGIAVEEEKRVIGVTTKVENIKKEEEKDCNGAEIQTKNEVSKPMVEAKDPISAAVEASKTSSANKNSKGATKETGGRASVASKSKKYAKDNLKSLISISQKQRPSLSQSISFPAKSSGEDVMQKSFNGYIVKTKVKHVQGNNGIRGEAPVRDLNKSTNSGVNSLAKTIAGMSGLKRSAFGRTTPVSPATKSQISEASLLDDHVSNTAKTAKANKDDDDCHSTTSSATPRLRSSGTGFSFRLEERAEKRKEFFSKLEEKTIAKEAEKTNLQAKSKENQEAEIKLLRKSLTFKATPMPNFYKEPPPKVELKKIPTTRPKSPKLGRHKEPAVNNNSGEDKSCSSPGGKQQQNDSNKGNKGHKDVISKKPIQKNQAKLKSEKNKEFQVPHDNNSESKNEMELQSEPSNSPLLLNSTTSEPVSSYEVIVGV* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2051 430 Coils Coil 266 286 - -
Pvu1g2051 430 MobiDBLite consensus disorder prediction 211 226 - -
Pvu1g2051 430 MobiDBLite consensus disorder prediction 145 164 - -
Pvu1g2051 430 MobiDBLite consensus disorder prediction 399 423 - -
Pvu1g2051 430 MobiDBLite consensus disorder prediction 59 77 - -
Pvu1g2051 430 MobiDBLite consensus disorder prediction 186 210 - -
Pvu1g2051 430 MobiDBLite consensus disorder prediction 356 398 - -
Pvu1g2051 430 MobiDBLite consensus disorder prediction 291 430 - -
Pvu1g2051 430 MobiDBLite consensus disorder prediction 103 122 - -
Pvu1g2051 430 PANTHER PROTEIN WVD2-LIKE 4 1 382 IPR044833 GO:0008017
Pvu1g2051 430 MobiDBLite consensus disorder prediction 336 355 - -
Pvu1g2051 430 MobiDBLite consensus disorder prediction 307 328 - -
Pvu1g2051 430 MobiDBLite consensus disorder prediction 181 242 - -
Pvu1g2051 430 Pfam Targeting protein for Xklp2 (TPX2) domain 241 310 IPR027329 -
Pvu1g2051 430 MobiDBLite consensus disorder prediction 32 89 - -
Pvu1g2051 430 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) FAMILY PROTEIN 1 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2051 Pvu-Chr1 46386606 46389980 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2051 - - gmx:100794426 582.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2051 1 46386606 46389980 Pvu7g2740 7 50358205 50361757 PCT