Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2038 AGTAAGAATGTTGCAGGAAATAAAACATATATTGGATGGAAGAATAGAACTTATGCTTTAGGGAACACAAAAAAAGTGAAATATAATTACTGCTACAAAATATTTAATGGAGGAATTTTCAGATTCAAACATCATCTTGCCAGAACAAGATATGACTCTGAACCTTGTGTGTACCAGAAGAAATCAAAAAAAGAGAGTTCAATAGTCTTGGACAAACTGATGGTGAGGAAGATAGTGAAAGTATCACTAGCAAGATCTACTCTGAATCAAATATACAAGAGAGGTGATAAAGAAAAAATTGATGTACAAATTGCTGAATTTTTCTACACAAGTGTCATCCCGTTCAATGATATTAGAAATCTAGCTTTTGCAAAGATGTGTGACATGATTGGTAGATATGGTGTTAGCTATAAACCTCCAACAAATCATGGTATTAGAGAGAAGCTTCTGAAACAAGTCGTGGACAAAACTGATATAAAACTTGAAGAGTATAAGGATGAATGGAAGATAACAGGTTGTACCATTATGTTTGATGGATGGACAAACAAGAAAAGACGTTCATTTTGTAATTTTTTGGTGAACAGTCCTAAAGGAACTGCGTTTCTCTATTCATTAGATACCTCTGACATCTCAGAAACTGCAGAAAAAATATTTAAAATGTTGGATGTTGTGGTAGAATTTGTTAGTGAGGAAAATGTAGTGCAGATAGTTACTGATAATGCTGCAAATTTCAAGGCAGTTGGAGGACTGTTGATTCAAAAAAGGGTGCACTTATATTGGACTCCATGTGCTGCCCATTGTATTGATTTAATCTTTGAAGATTTTGAAAAGCAATTAAAGGTCCATGAAACTACTATCAAGAAGGGAAGAAGGATCCCTACCTACATTTATGGTAGACCAATGTTAATTACCATTTTAAAAAAGTTTACAAATGGAAGGGAGTTGATAAGGCCTGAAATGACTAGATTTGTCATAGCATACTTCACTCTATCGATTTTGGAAGAATGTAACTATATGCTTAAAATTTGTGTCCCTCTTATGGTGGTCTTTCGATTGGTAGATTCATATGTAAAACCCGCAATGGGATTTATATATGAGGAGATGGATTGCACCAAAGAGAAGATTAAAAACAACTTTAATAATATCAATAAAAGTTATGAACCTGTTTGGAAAATCATTGATCAGAGGTGGAATAATCAGCTTCATAGGCCTTTGCATGCAGTTGCTTATTACCTAAACCCCCAATTACACTATCAACCAAACTTTAGAAATGATGATGCTGAGGTGAAGGAGGGGTTGTACATATGCATGAGAAGATTGGTTAATGACGTTGCAGAATGGACAAAAATCAATTTGCAACTTACTGATTTTCACTATTCAAGAGGAACATTTTCTTTGGAAAATGCAAAGGTGTGTAGGAAAGGTATGTTACCTAGAGAATGGTGGGTGATGTTTGGGGATAGAACTCCAAAACTAAAGAGGTTTGTTATTCGAGTTCATACAAAAAGAAGAAATTGTTTGCACCAGAAGAAAATGAATGACTTGGTTTATGTAATGTATAACTCGAAGTTGAGAAACAAACAAATTAGAAGATTTGTTGCTCTCCCATTTGAAGACATTGAGTCAGATAATGAATGGATAACTGAAGAATGA 1653 0.3412 SKNVAGNKTYIGWKNRTYALGNTKKVKYNYCYKIFNGGIFRFKHHLARTRYDSEPCVYQKKSKKESSIVLDKLMVRKIVKVSLARSTLNQIYKRGDKEKIDVQIAEFFYTSVIPFNDIRNLAFAKMCDMIGRYGVSYKPPTNHGIREKLLKQVVDKTDIKLEEYKDEWKITGCTIMFDGWTNKKRRSFCNFLVNSPKGTAFLYSLDTSDISETAEKIFKMLDVVVEFVSEENVVQIVTDNAANFKAVGGLLIQKRVHLYWTPCAAHCIDLIFEDFEKQLKVHETTIKKGRRIPTYIYGRPMLITILKKFTNGRELIRPEMTRFVIAYFTLSILEECNYMLKICVPLMVVFRLVDSYVKPAMGFIYEEMDCTKEKIKNNFNNINKSYEPVWKIIDQRWNNQLHRPLHAVAYYLNPQLHYQPNFRNDDAEVKEGLYICMRRLVNDVAEWTKINLQLTDFHYSRGTFSLENAKVCRKGMLPREWWVMFGDRTPKLKRFVIRVHTKRRNCLHQKKMNDLVYVMYNSKLRNKQIRRFVALPFEDIESDNEWITEE* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2038 550 SUPERFAMILY Ribonuclease H-like 162 523 IPR012337 -
Pvu1g2038 550 PANTHER OSJNBA0013A04.12 PROTEIN 26 528 - -
Pvu1g2038 550 Pfam Protein of unknown function (DUF 659) 140 292 IPR007021 -
Pvu1g2038 550 PANTHER OS09G0499600 PROTEIN 26 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2038 Pvu-Chr1 46284686 46286770 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2038 - - pvu:PHAVU_001G196600g 1120.53