Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2029 ATGGATATTGAGTCAACAATGGAAACAAACAAGCGAGGGTTTCTTGCTCATTGGGGAAACTGCCTCAAGGCTTTGCCTGGGAACATCAAGTCCATGGTTATCAACTTCACAAGGAGCATAGCAAAGATTGGAAAAGATGACCCCAGACGAGTATTTCACTCATTAAAAGTTGCATTTGCTCTTACCTTGGTTTCCTTGTTTTACTACTCGAGGCCTCTTTATGATGGCTTCGGAGTTGCTGGAATGTGGGCTGTTCTGACAGTGGTGGTTGTATTTGAATTCAGCGTAGGTGCAACCCTCAGCAAAGGTTTGAATAGAGGATGTGCTACATTATTAGCTGGTGCTTTAGGGGTTGGAGGGCAACACTTAGCTACTACTTTTGGAGAAAGAGAAAAACCTATTGTTCTTGGGATCCTAGTCTTCATTCTAGCCGCAGGAGCTACTTTTTTCAGATTTTTTCCGAAGATCAAGGCAAGATATGACTATGGGGTGGTGATATTTATCTTGACATTCTGTTTAGTTACTGTCTCGGGGTATCGAGTGGAACAACTCTTTGAGCTTGCCCATCAGAGACTTTCAACAATTTTAATAGGGGCAACAGCTTGCATGGTCATCTCCATTTTCATTTGTCCAGTATGGGCAGGTGAAGACCTTCACAAGTTGGTAGCTTCCAACGTAGAAAAGTTGGCAAATTACCTAGAAGGATTTGAAGTGGAATATTTTCATTGCTCAGAGGGTAAAGAAAAATGTGAGAAGTCAGTTCTTGAGGGATACAAAAGTATTCTCAACTCCAAAGCAAGTGAAGAGTCCTTGGCAAATTTTGCAAGGTGGGAACCGGGACATGGCCGTTTTCGTCTTCGACATCCTTGGAAGCAGTACTTGAAGATTGGAGTACTTACTCGGGAATGTGCTTACAAGATTGAAACCCTTAACAACTACCTTAACCCGGAAATCCAAACATCTTTGGAATTCAAGTGTAAAGTTCAAGAACCATGCACAAAGATGATTTCAGAGTCGAACAAGGCGTTAAACGTAATATCTTCATCAGTCAAAACAATGACACACCCATCAGCTGCCAAAAGCCACATCGAGAATTCAAAAACTGCAGTTGAAGACCTCAAATTTGTCCTTGAAACCGTTTCTTTGGAAGACGCTGATCTGCTAACTATAATCCCAGTTGCCACGGTTGCTTCAATTCTCGAAGAAATCACCAAGTCAGTGGAGAAAATATACGAGTCTGTTTCCGAGCTTTCTGACTTAGCCTACTTCAAGAGTGTTGTAGAATCCAATGTTTCACCAGAGAAGCCACACCTTCTTCATCGAGGTATCGTAAAACCTGTTGTGGATATTGAAACCACTGTCGACCACGTTGAAATTACGATCCCAGAGATAACCACAGACTCGCCAGAAAAAGAAAAGACACGAACAAAACCCTCCGAACATATGTAA 1449 0.421 MDIESTMETNKRGFLAHWGNCLKALPGNIKSMVINFTRSIAKIGKDDPRRVFHSLKVAFALTLVSLFYYSRPLYDGFGVAGMWAVLTVVVVFEFSVGATLSKGLNRGCATLLAGALGVGGQHLATTFGEREKPIVLGILVFILAAGATFFRFFPKIKARYDYGVVIFILTFCLVTVSGYRVEQLFELAHQRLSTILIGATACMVISIFICPVWAGEDLHKLVASNVEKLANYLEGFEVEYFHCSEGKEKCEKSVLEGYKSILNSKASEESLANFARWEPGHGRFRLRHPWKQYLKIGVLTRECAYKIETLNNYLNPEIQTSLEFKCKVQEPCTKMISESNKALNVISSSVKTMTHPSAAKSHIENSKTAVEDLKFVLETVSLEDADLLTIIPVATVASILEEITKSVEKIYESVSELSDLAYFKSVVESNVSPEKPHLLHRGIVKPVVDIETTVDHVEITIPEITTDSPEKEKTRTKPSEHM* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2029 482 MobiDBLite consensus disorder prediction 463 482 - -
Pvu1g2029 482 MobiDBLite consensus disorder prediction 465 482 - -
Pvu1g2029 482 Pfam Aluminium activated malate transporter 42 418 IPR020966 GO:0015743
Pvu1g2029 482 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 1 439 - -
Pvu1g2029 482 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 8 1 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2029 Pvu-Chr1 46156890 46159124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2029 1 461 Miscellaneous Gene Families AT3G11680 56.383 8.35e-174 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2029 - - gmx:100170704 814.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2029 1 46156890 46159124 Pvu1g2029 1 46156890 46159124 ECH
Pvu1g2029 1 46156890 46159124 Pvu7g1761 7 40353586 40357116 PCT