Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2022 ATGTCGGTGAAGGAGTGCCACCACCACAAGGGAAAGAAGCACAAACTCTTCAAACGCATATGCTGGTGGATAGTCATCTTCGTGTTCATCGTGTTGCTCACAGTTCTGATAATCTGGGCGATCCTCAAGCCTACAAAGCCAACCTTCATCCTCCAGGACGTCACCGTGTTCGGATTCAACGCCACCATCCCGAACCTCCTCACCTCAAGCTTTCAGGTGACTCTGTCTTCGCGCAACCCCAACGACAAAATCGGCATCTACTACGACCGTCTCAGCACCTACGTCACCTACAGGAGCCAGCAAGTCACGTACCGAACCTCAATCCCTCCCTCCTACCAAGGTCACAAGGAAGAAGACGTCTGGTCCCCATTCGTCTACGGCACCAACGTCCCCGTCGCGCCCTACAACTTCCTTGGCCTCAGTCAAGACCAGACTAACGGCAACGTCCTCGTCATCGTTAAAGTTGACGGTAAAGTCCGATGGAAGGTCGGTGCCTTTATCTCTGGCCACTACAACCTCTATGTAAGGTGCCCTGCTTTCATAACCTTTGGCCCTCGAAGCACCGGAATTGCTCTCAGCAATAACGCCGTTAAGTATCAACTGGTTCAGCGCTGCACCGTCGGGGTTTGA 630 0.5302 MSVKECHHHKGKKHKLFKRICWWIVIFVFIVLLTVLIIWAILKPTKPTFILQDVTVFGFNATIPNLLTSSFQVTLSSRNPNDKIGIYYDRLSTYVTYRSQQVTYRTSIPPSYQGHKEEDVWSPFVYGTNVPVAPYNFLGLSQDQTNGNVLVIVKVDGKVRWKVGAFISGHYNLYVRCPAFITFGPRSTGIALSNNAVKYQLVQRCTVGV* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2022 209 Pfam Late embryogenesis abundant protein 74 177 IPR004864 -
Pvu1g2022 209 PANTHER OS05G0367900 PROTEIN 4 209 IPR044839 GO:0098542
Pvu1g2022 209 PANTHER LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN 4 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2022 Pvu-Chr1 46085331 46086373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2022 13 177 EF-hand Containing Proteins AT5G21130 20.809 6.88e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2022 - - gmx:100795832 377.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2022 1 46085331 46086373 Pvu1g2022 1 46085331 46086373 ECH
Pvu1g2022 1 46085331 46086373 Pvu7g2766 7 50692425 50693902 PCT