Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2012 TTTTCACACCTTGCATGGGTTCAAACTGATAGAAAGTCGGGTGGTCTTGGCGACTTGAATTATCCATTGATTTCTGATGTCACCAAATCCATCTCAAAATCTTATGATGTTCTCATTCCCGATCAGGGGATTGCTTTGAGAGGATTGTTCATTATTGACAAGGAAGGGGTTATTCAGCATTCTACCATTAACAACCTGGCCATTGGTAGAAGTGTTGATGAGACAAAGAGAACGCTCCAGGCCTTGCAGTATGTGCAGGAGAACCCAGATGAAGTTTGCCCAGCTGGGTGGAAGCCTGGTGAGAAGTCCATGAAACCAGACCCTAAACTTAGCAAAGAGTACTTCTCTGCTATTTAG 357 0.4398 FSHLAWVQTDRKSGGLGDLNYPLISDVTKSISKSYDVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETKRTLQALQYVQENPDEVCPAGWKPGEKSMKPDPKLSKEYFSAI* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2012 118 Pfam C-terminal domain of 1-Cys peroxiredoxin 81 116 IPR019479 GO:0051920
Pvu1g2012 118 SUPERFAMILY Thioredoxin-like 1 116 IPR036249 -
Pvu1g2012 118 PANTHER 1-CYS PEROXIREDOXIN PER1 1 118 - -
Pvu1g2012 118 Gene3D Glutaredoxin 1 118 - -
Pvu1g2012 118 Pfam AhpC/TSA family 2 60 IPR000866 GO:0016209|GO:0016491
Pvu1g2012 118 PANTHER THIOREDOXIN PEROXIDASE 1 118 - -
Pvu1g2012 118 CDD PRX_Typ2cys 1 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2012 Pvu-Chr1 46025997 46026943 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2012 K03386 - csin:114277277 236.498