Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2009 ATGGCCCTGCCCCGTGGATCAATCCTCACTCGATCAGTGTGGTCCTCCAATTTGGAATCGGAGTTCGACTTAATCCGATCCGTCATCGACTTCTTCCCTCTCATCTCGATGGACACCGAGTTCCCCGGCGTCGTCGTGCGCCCCGACACCTGCGACCCCTCCTTCCGCCACCGCCAACCAGCCGCGCACTACGCCGTGCTTAAAGCCAACGTCGACCGCCTCCACCTGATCCAGATCGGTCTTACTCTCTCCGATCAAGTGGGAAACCTTCCCACACTCGGCACCTCCAACGCCTTTGTCTGGGAGTTCAACTTCCGAGACTTCGACGTATCGCGTGACGCCCATGCCCACGACTCCGTTGAGTTGCTACGGCGTCAGGGCATCGATTTTGAGAAGAATCGGGAGTTTGGGATCGACTCTGTACGGTTCGCCGAGCTCATGATGTCTTCTGGTCTGGTCTGCGATGACCCGGTTAGCTGGGTGACGTTTCACAGTGCCTATGATTTCGGATACCTGGTGAAATTGTTGACCCAGCGCACTCTGCCGGAGGAATTGGCAGAATTTCTCTGTCTGGTGAGGGTGTTTTTCGGTGAGAGAGTCTTTGATGTGAAGCACTTGATGAGGTTCTGCTCAAATCTTCATGGAGGTTTGGATCGAGTATGCCAGTCGCTGAATGTGGAACGAGTTGTAGGGAAAAGCCACCAGGCGGGTTCTGATAGCTTGCTCACTCTGCACGCTTTTCAGAATATAAGAGAGGTTTATTTTGGCAAGGCTGATGGACTTGTTCAGTATGCTGGGGTCTTGTATGGTTTGGAGGTTTTCTAA 825 0.5358 MALPRGSILTRSVWSSNLESEFDLIRSVIDFFPLISMDTEFPGVVVRPDTCDPSFRHRQPAAHYAVLKANVDRLHLIQIGLTLSDQVGNLPTLGTSNAFVWEFNFRDFDVSRDAHAHDSVELLRRQGIDFEKNREFGIDSVRFAELMMSSGLVCDDPVSWVTFHSAYDFGYLVKLLTQRTLPEELAEFLCLVRVFFGERVFDVKHLMRFCSNLHGGLDRVCQSLNVERVVGKSHQAGSDSLLTLHAFQNIREVYFGKADGLVQYAGVLYGLEVF* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2009 274 PANTHER CCR4-ASSOCIATED FACTOR 1 HOMOLOG 11-RELATED 4 273 - -
Pvu1g2009 274 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 4 273 IPR039637 GO:0004535|GO:0030014
Pvu1g2009 274 Pfam CAF1 family ribonuclease 13 138 IPR006941 -
Pvu1g2009 274 Gene3D - 3 273 IPR036397 GO:0003676
Pvu1g2009 274 SUPERFAMILY Ribonuclease H-like 11 271 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2009 Pvu-Chr1 45986585 45987854 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2009 K12581 - gmx:100805583 510.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2009 1 45986585 45987854 Pvu1g2009 1 45986585 45987854 ECH