Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2002 ATGGCACTTGGCTTGCACTTCATACTCAGACTCTTTTCTCTGTATTTGGTGACCTCTTCCACCTTTGCTTTGTCCCCTATCCTTCCCAGATTTCCCTCTTCAGCAGTTAGTGCAGAGCTAAAGCAGTCTTCCAACTCTGCTCCAAATAGCCTATACAGAACAAAGTTCTTCACCCAAATACTCGATCACTTCAATTTCAATCCCCAGAGCAATCACGTTTTTCAACAAAGATATCTCATCAATGATACCTTTTGGGGTGGTGCCAAAAACAATGCTCCAATCTTTGTCTACACGGGAAACGAAGGGAACATAGAATGGTTCACTCAGAACACAGGCTTTATGTTCGAAAATGCTCCTTCTTTTCATGCCCTTTTGGTTTTTATTGAGCATAGATTCTACGGAAAATCAATACCATTTGGGGGAAACAGGAAGGTTGCATATGCAAATGCTAGCACACTGGGGTATTTGAGCTCCACACAGGCATTAGCTGATTATGCCACTCTCATCATTGATTTGAAGAAGAATTTGTCAGCAACTGATTCTCCAGTTGTGGTGTTTGGAGGATCCTATGGAGGAATGTTGGCAGCTTGGTTCAGGATGAAGTATCCACACGTTGCAATTGGAGCTCTAGCATCCTCCGCTCCAATTCTCCATTTCATGGATTTGGTTTCACCAGATATCTTCAACAACATCATCTCACAAGACTTCAGGAGCGAGAGTGAGAATTGTTACAAAGTGTTAAAAGGGTCATGGAAACTAATAGACGACACAGCCAACAAACCCGGAGGACTGCAACTGTTACAGAAATCATTCAGAATTTGCAAAAGCAATGATTTTGGGCCAGGTTTTCTGGAAAATTGGCTTAGGACAGCGTGGGTTTATACAGCTATGACAGATTATCCCACACCATCCAATTTCCTCAGTCCCTTACCAGCATATCCCATAAAAAAGATGTGTGAGGCAATAGATAGGGAAAAGAATGATGGATTAGGGAAGTTGTATGCAGCAGCTAGTGTGTACTACAACTATACAGGCACTGCAACTTGTTTCGATTTGGATGACGATTCAGATCCTCACGATCTTGGAGGATGGCAATGGCAGGCCTGCACAGAGATGATAATGCCCGTAGGTGGAAGCAATAAGCACAGCATCTTCCCAGAATATGTGTGGTCATACCAAGACAGAGCCTCTGCATGCCAATTTTTCTACAACGTTACCCCAAGACCACACTGGATTACCACTGAGTTTGGTGGCCATGCTATTCAGACAGTTCTGAAAAGGTCTGCAAGCAACATTATATTCTTCAATGGTTTAAGAGATCCTTGGAGTGGTGGAGGGGTGTTAAAGAATATATCAAAAACAATAGTTGCTATAGTTGAAAAAAGAGGAGCTCATCATGTAGACCTAAGGTATTCTGCTAAGGAAGATCCAAAGTGGCTTAAAGATGTAAGGAGACAGGAGGTAAATATCATAGCAAGTTGGATCTCACAATACTATCAAGACCTACACTCCAATAACTAA 1521 0.4227 MALGLHFILRLFSLYLVTSSTFALSPILPRFPSSAVSAELKQSSNSAPNSLYRTKFFTQILDHFNFNPQSNHVFQQRYLINDTFWGGAKNNAPIFVYTGNEGNIEWFTQNTGFMFENAPSFHALLVFIEHRFYGKSIPFGGNRKVAYANASTLGYLSSTQALADYATLIIDLKKNLSATDSPVVVFGGSYGGMLAAWFRMKYPHVAIGALASSAPILHFMDLVSPDIFNNIISQDFRSESENCYKVLKGSWKLIDDTANKPGGLQLLQKSFRICKSNDFGPGFLENWLRTAWVYTAMTDYPTPSNFLSPLPAYPIKKMCEAIDREKNDGLGKLYAAASVYYNYTGTATCFDLDDDSDPHDLGGWQWQACTEMIMPVGGSNKHSIFPEYVWSYQDRASACQFFYNVTPRPHWITTEFGGHAIQTVLKRSASNIIFFNGLRDPWSGGGVLKNISKTIVAIVEKRGAHHVDLRYSAKEDPKWLKDVRRQEVNIIASWISQYYQDLHSNN* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2002 506 PANTHER PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED 2 503 - -
Pvu1g2002 506 Gene3D alpha/beta hydrolase 56 495 IPR029058 -
Pvu1g2002 506 Pfam Serine carboxypeptidase S28 59 485 IPR008758 GO:0006508|GO:0008236
Pvu1g2002 506 Gene3D Serine carboxypeptidase S28, SKS domain 224 389 IPR042269 -
Pvu1g2002 506 PANTHER LYSOSOMAL PRO-X CARBOXYPEPTIDASE-LIKE PROTEIN 2 503 - -
Pvu1g2002 506 SUPERFAMILY alpha/beta-Hydrolases 111 469 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2002 Pvu-Chr1 45894861 45899700 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2002 K01285 - gmx:100781698 908.672
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2002 1 45894861 45899700 Pvu1g2002 1 45894861 45899700 ECH