Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1996 ATGTCTCAGACGAAGAAATTGACGCCGAATCTGGATCAGCAGAGCACGAAGGTGCTGAATCTCACCGTGCTCCAGCGAATCGATCCATTCATCGACGAGATACTCTTCACCGCCGCTCATGTCTCCTTCTACGACTTCAACATCGAAAGCAACCAGTGGAGTCGCAAGGATGTCGAAGGATCTCTCTTCGTTGTCAAGAGGAATTCACAGCCACGGTTTCAGTTTATTGTGATGAATCGACGAAATACAGATAACCTGGTGGAGAATCTATTGGATTTTGAGTATGAACTTAAAAAACCGTACCTATTATATCGGAATGCAGCTCAAGAAGTTAATGGTATATGGTTTTACAATCCAGACGAATGTGAGGAAGTTGCAAATCTTTTTAACAGAATACTTAATTTGTACCCAAAGGCATCTCCAACTACAACACCGCCTGCTAACAGAAGTGAGTTTGAGGAACACCAGCCAGTGTCAATTATACCAGAAAGCTCTCTAGAATCGTCTTCAGCTGCTGCTTCTGCAATTGATTCTGTTGAAGATCCTGTATTCACAAACTTCTTCAGCACATTGAAGGCTACTGGAAATTATGCTTCCAATGTAGAAAATGATAGGCAGCATTCTACGACCGTCACTTCTGCTGCTCCTAGTGGTTTATTTTCTCCTTCACCTATCGTGCAAATACCTGCCTCTCATTCAACCTCATCTATATCAGGTTTCCCTGTTGACTCTCTTGAAACAGTCAAGAGTGGCAATCAAGCCATTAGTCTTGTTAAGCCTTCTACTTTTTTCACATCCACTTCATCTTCACTGTTAGCTCCACCTATTTCTTCATCTGTGCTGCATAGTTCAGTTGTGAATCATTCCCTGAATCTGCCACGACCATATGGCACACCAGTACTTCAACCCTTCCCGCCCCCTATTCCTCCTCTATCTCTTACCCCTATTCCAAGCTCCAGTCCAAATAGACCTGTAATTGGCAGGGATAGCGTTCGCGATGCACTTTTATCATTGGTTCAGGATGATCAATTCATTGACATGATGTTCCAGGCATTACTGAAGGTGAATCATTCATGA 1077 0.4318 MSQTKKLTPNLDQQSTKVLNLTVLQRIDPFIDEILFTAAHVSFYDFNIESNQWSRKDVEGSLFVVKRNSQPRFQFIVMNRRNTDNLVENLLDFEYELKKPYLLYRNAAQEVNGIWFYNPDECEEVANLFNRILNLYPKASPTTTPPANRSEFEEHQPVSIIPESSLESSSAAASAIDSVEDPVFTNFFSTLKATGNYASNVENDRQHSTTVTSAAPSGLFSPSPIVQIPASHSTSSISGFPVDSLETVKSGNQAISLVKPSTFFTSTSSSLLAPPISSSVLHSSVVNHSLNLPRPYGTPVLQPFPPPIPPLSLTPIPSSSPNRPVIGRDSVRDALLSLVQDDQFIDMMFQALLKVNHS* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1996 358 Pfam Dcp1-like decapping family 17 130 IPR010334 GO:0000290|GO:0008047|GO:0043085
Pvu1g1996 358 Gene3D - 7 135 IPR011993 -
Pvu1g1996 358 CDD EVH1-like_Dcp1 19 133 - -
Pvu1g1996 358 SUPERFAMILY PH domain-like 19 138 - -
Pvu1g1996 358 PANTHER MRNA-DECAPPING ENZYME-LIKE PROTEIN ISOFORM X1 1 354 - -
Pvu1g1996 358 PANTHER TRANSCRIPTION FACTOR SMIF DECAPPING ENZYME DCP1 1 354 IPR010334 GO:0000290|GO:0008047|GO:0043085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1996 Pvu-Chr1 45849221 45855565 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1996 K12611 - gmx:100786833 534.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1996 1 45849221 45855565 Pvu1g1996 1 45849221 45855565 ECH