Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1993 GCAGATGCAAAAACCATTAGATTTAGAGAGAAAGTTACAAAGAAGGGTGGTATCTGGAAAGACATTTATGGAATTGATGAAAAGAAGGTTGCTGACATGGTTAGAGAAGATCAAGTTGATATTTTGGTAGAACTTACAGGTCATACCGCAAACAATAAATTAGGAATGATGGCATGTCGACCTGCACCTGTTCAGGTGACTTGGATTGGTTATCCCAATACAACAGGATTGCCTACAATTGATTATAGAATCACCGATTCTCTGGCAGACCCTCCTGAAACAAAGCAGAAACACGTCGAGGAGTTGGTTAGATTGCCCGAATGTTTCCTTTGTTACACCCCTTCCCCTGAGGCTGGTCCTGTTTCTTCAACTCCAGCACTTTCTAATGGCTTCATCACATTTGGTAGTTTCAACAATCTTGCCAAGATTACACCAAAGGTATTGCAGGTCTGGGCAAGGATATTGTGTGCAATTCCGAATTCCCGCCTCGTGGTAAAATGCAAACCATTTTGTTGTGACAGTGTGCGACAAAGATTCCTTTCAACACTGGAGCAGTTGGGCTTAGAACCACTACGTGTTGATCTTTTGCCCCTTATTCTTCTTAACCATGATCATATGCATGCCTATTCTCTAATGGACATCAGTTTGGATACATTTCCATATGCTGGAACAACAACAACTTGTGAATCTTTATATATGGGAGTTCCATGTGTCACTATGGCTGGTTCAGCACACGCACACAATGTTGGTGTCAGTCTTCTTAGTAAAGTTGGGATGGAGCATTTGATTGCCAAAAATGAAGATGAGTACGTTGAATTGGCTCAGAAGTTGGCTTCTGACATTTCCGCACTACATAATTTGAGAATGAGTCTGCGAGATCTCATGTCTAAGTCCCCTGTCTGTGATGGTGCAAAATTTATCTTAGGTCTAGAGTCAACTTACAGAAATATGTGGCACAGGTATTGTAGAGGAGATGTTCCATCTTTGAAACGCCTGGAATTGTTAGAAGAAGTTGCCATGGGTGACTTGTTAAATAAGAATTCTGAGCCAGAAAGGATTGCAAACTCAAGGGAGGACAGTCCTGGATCTGTCAAGGCCAATGGATTTGATACAATGCCCGTCTCAAAGCTTAACATGGACAGCTGCGAAGAAAACGGTGGGCCATCAAATCGCAGTAGTAAACAAGTTGCTGTTGGAAGAAGCTGA 1206 0.4212 ADAKTIRFREKVTKKGGIWKDIYGIDEKKVADMVREDQVDILVELTGHTANNKLGMMACRPAPVQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELVRLPECFLCYTPSPEAGPVSSTPALSNGFITFGSFNNLAKITPKVLQVWARILCAIPNSRLVVKCKPFCCDSVRQRFLSTLEQLGLEPLRVDLLPLILLNHDHMHAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGSAHAHNVGVSLLSKVGMEHLIAKNEDEYVELAQKLASDISALHNLRMSLRDLMSKSPVCDGAKFILGLESTYRNMWHRYCRGDVPSLKRLELLEEVAMGDLLNKNSEPERIANSREDSPGSVKANGFDTMPVSKLNMDSCEENGGPSNRSSKQVAVGRS* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1993 401 SUPERFAMILY TPR-like 146 273 IPR011990 GO:0005515
Pvu1g1993 401 Gene3D Glycogen Phosphorylase B; 115 300 - -
Pvu1g1993 401 Gene3D - 1 114 - -
Pvu1g1993 401 MobiDBLite consensus disorder prediction 349 401 - -
Pvu1g1993 401 PANTHER UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE SPINDLY-RELATED 1 333 - -
Pvu1g1993 401 MobiDBLite consensus disorder prediction 382 401 - -
Pvu1g1993 401 Pfam Glycosyl transferase family 41 6 110 IPR029489 -
Pvu1g1993 401 Pfam Glycosyl transferase family 41 127 306 IPR029489 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1993 Pvu-Chr1 45827076 45837312 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1993 1 375 Glycosyltransferase AT3G11540 79.255 0.0 636
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1993 K09667 - pvu:PHAVU_001G1923000 790.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1993 1 45827076 45837312 Pvu1g1993 1 45827076 45837312 ECH