Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1991 ATGGATTCCATTGAAGCAAACTTCACCATGCAAAGCCATACAGAGGAAAAACAAGGTGTGCACACCTATGTTGCTCAGTGGCCTATTTCCTCTCTAGCATGGTCAATGCGTCGTGACAGAAGCCCTCGTCTTGCCATTGGCAGTTACTTGGAAGATTACACCAACAAGGTTGAACTTGTGCACTTCAACTACGACACCTTCAATTTCACCACCGACCCTCGTTTTGCGTTTGACCACCCTTATGCACCAACAAACATCATGTTCTTTCCCTCCGAGGATGACACCAATCCAGACCTCATTGCCACCTCAGGTGACAACCTTAGATTATGGGAAATCCACGAAGATCATATTCAACTAAAGTCCCCCCTCATTGGTAACAAAGTTAGTGATCACTCGGCTATTACCTCGTTTGATTGGGCTGTGTTTGATACTCGTCTAATAGCCACTTCTAGTGTAGACACCACATGCACCATCTGGGACATTGAAAGGGAAGTCATGAAGGCACAGCTAGTGGCACATGACAAAGAAGTGTATGACATTTCATGGGGTGGGTTCAATGTCTTTGCTTCCGTGTCAGGTGATGGTTCTGTGAGGGTGTTTGACTTAAGAGACAAGGAGAAATCTACTATAATTTATGAAAATCCTGTGCAGGATTGTCCTTTGCTCCGATTGGAATGGAATAAAAGTGATCCAAGATTTATGGCCACAGTGGGATTGGACAGCAACAAGGTGGTGATATTGGATATCAGGCTTCCAACCACACCATTTATGGAGTTGAGTAAACATAGAACATGTGTTAATGCGATGTCATGGTCCCCAGATTTTGGACGACATTTGTGCTCTGTTGGCGATGATGCAAGGGCCTTCATCTGGGACGTTAAGGACTCAAGGAATGGCTGTGAGGTGGAGCCGGTGATGTGGTACGGATCATCAGCTGAAATCAACCACGTACGTTGGTCTCCAATGCAGCTGGATTGGATTGCCCTTGCTTTCTTCAACAACTTACAACTACTCAAAGTCTAG 1023 0.4536 MDSIEANFTMQSHTEEKQGVHTYVAQWPISSLAWSMRRDRSPRLAIGSYLEDYTNKVELVHFNYDTFNFTTDPRFAFDHPYAPTNIMFFPSEDDTNPDLIATSGDNLRLWEIHEDHIQLKSPLIGNKVSDHSAITSFDWAVFDTRLIATSSVDTTCTIWDIEREVMKAQLVAHDKEVYDISWGGFNVFASVSGDGSVRVFDLRDKEKSTIIYENPVQDCPLLRLEWNKSDPRFMATVGLDSNKVVILDIRLPTTPFMELSKHRTCVNAMSWSPDFGRHLCSVGDDARAFIWDVKDSRNGCEVEPVMWYGSSAEINHVRWSPMQLDWIALAFFNNLQLLKV* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1991 340 ProSiteProfiles Trp-Asp (WD) repeats profile. 170 210 IPR001680 GO:0005515
Pvu1g1991 340 Pfam WD domain, G-beta repeat 129 160 IPR001680 GO:0005515
Pvu1g1991 340 Pfam WD domain, G-beta repeat 170 201 IPR001680 GO:0005515
Pvu1g1991 340 Gene3D - 18 337 IPR015943 GO:0005515
Pvu1g1991 340 ProSiteProfiles Trp-Asp (WD) repeats profile. 259 297 IPR001680 GO:0005515
Pvu1g1991 340 ProSitePatterns Trp-Asp (WD) repeats signature. 279 293 IPR019775 -
Pvu1g1991 340 SUPERFAMILY WD40 repeat-like 26 330 IPR036322 GO:0005515
Pvu1g1991 340 SMART WD40_4 70 111 IPR001680 GO:0005515
Pvu1g1991 340 SMART WD40_4 121 160 IPR001680 GO:0005515
Pvu1g1991 340 SMART WD40_4 163 201 IPR001680 GO:0005515
Pvu1g1991 340 SMART WD40_4 252 292 IPR001680 GO:0005515
Pvu1g1991 340 SMART WD40_4 207 248 IPR001680 GO:0005515
Pvu1g1991 340 PANTHER WD REPEAT-CONTAINING PROTEIN LWD1-LIKE 10 340 - -
Pvu1g1991 340 PANTHER WD REPEAT CONTAINING PROTEIN 10 340 IPR045159 -
Pvu1g1991 340 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 259 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1991 Pvu-Chr1 45805874 45808752 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1991 K11805 - zju:107416321 525.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1991 1 45805874 45808752 Pvu1g1991 1 45805874 45808752 ECH