Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1990 TGGGTGGGTCAAAATTGGGAGCAAGTCCCATCTCAGCTCTGCACTTTTTTCCGTCAGAAAAAATCTCTGTTCTGTGGATTGCAATCGGAGACAGAGATAAAGTCCCTTCTTGAGCATGGCAATGACAATACACGCCTTGCTGGGCTGGCTTTTATGTTCTCGGCTAGCATTTTGCTTCAGATTCTGGCATGTGTAATATATAACAATTGGTGGCCCATGTTATCAGCTCTGATGTATGTGCTGGTACCTATGCCTTGCTTATTCTTTGGAGGTGGATCTACTCAATTTCTAATGAGCCGTGATGGTGGGGGTTGGATAGATGCTGCAAAATTTTTGACTGGAGCATCAGCAGTTGGGAGCATAGCCATTCCTATAATCCTCAAACACGCACATATGATTGAGACAGGCGCAATGGTCATTGAGCTTGTATCGTTCTTCATATTTATATGTACTGTTTTATGTTTCCACCAAGCCAACCTTGACGATGATTGGTAA 495 0.4343 WVGQNWEQVPSQLCTFFRQKKSLFCGLQSETEIKSLLEHGNDNTRLAGLAFMFSASILLQILACVIYNNWWPMLSALMYVLVPMPCLFFGGGSTQFLMSRDGGGWIDAAKFLTGASAVGSIAIPIILKHAHMIETGAMVIELVSFFIFICTVLCFHQANLDDDW* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1990 164 PANTHER RH04491P 46 163 - -
Pvu1g1990 164 Pfam Vacuolar protein sorting 55 47 158 IPR007262 -
Pvu1g1990 164 PANTHER LEPTIN RECEPTOR-RELATED 46 163 IPR007262 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1990 Pvu-Chr1 45801760 45804030 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1990 31 155 EF-hand Containing Proteins AT1G32410 51.200 1.51e-40 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1990 - - pvu:PHAVU_001G192100g 342.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1990 1 45801760 45804030 Pvu1g1990 1 45801760 45804030 ECH