Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1985 ATGGTTTCCCCCAACTCTAGCACCATTTTTCTCTTCCTTTTATCCCTTCTGTTACTCATTAACAATGGCGTTCAAGCTTTTCATAAAGTATATCCCCATCTTCAATCTGTTTCAGTACTTTCCATTGGTGCACAGCACAGAACTGGATACCATTTTCAACCTCCTAAAAACTGGATCAATGATCCAAATGGACCCATGTACTACAATGGAATCTACCATTTTTTCTATCAGTACAATCCAAAGGGTTCGGTGTGGGGTAACATAGTGTGGGCCCACTCAGTATCAAAGGATCTGATAAACTGGGAAGCTGTAGAACACGCGATTTATCCATCGAAGCCCTTCGACAAATACGGGTGTTGGTCGGGCTCAGCGACAGTAGTCCCAGGTAAGGGACCCATAATTCTCTACACTGGAGTCAAGGACGAGGCACAAAATCAAGTCCAATGTTACGCTGTACCCGAAGACCCCAAGGACCCGTACCTCCGAAAATGGGTAAAACCCGACAATTTGAACCCGATTTTGGTCCCCGACAAAGAAGTAAACGGCAGTGCGTTTAGGGATCCGACAACGGCTTGGTGGAGCAAAGATGGGCACTGGAGAATATTGGTGGGTAGTAGAAGGAAGGAAAGAGGAGTGGCTTATTTGTACAGAAGCAAAGACTTTAAGACATGGGTTCGGGCCAAACACCCGCTCCATTCCAAGGGCGACACGGGTATGTGGGAGTGCCCCGATTTTTACCCTGTTCCGCTAAAAAACAATTTGGGGTTGGACAGTGTGGTGGACGGAAAACAAGTGAAATTCGTGTTGAAAAATAGTCTTGATTTGACTAGGTATGACTACTACACTATAGGAAGCTATGACAAGGATAAGTATGTTCCTGACAACACTTCCGAAGATGGTTGGGGTGGATTAAGGTATGATTATGGCAATTTTTATGCTTCCAAGTCCTTTTTTGATCCGAGCAAGAAAAGAAGAGTGATATGGGGTTGGGCAAACGAGTCTGATACCACAGATGACGATGTTCTTAAAGGATGGGCAGGGATTCAGGCGATTCCGCGAACAGTGTGGCTGGATCCAAATGGGAGGCAATTGTTACAATGGCCAGTTGAAGAATTAGATAGTCTTAGAGGGAAAGAAGTTAACATGAAGAGTCAGAAGCTTGAGAAGGGAGTTAATGTTGAAGTAAAAGGAATCACTGCTGCACAGGCAGATGTGGAAGTTAAATTTTCATTCTCGAGTTTGGACAAGGCAGAGCCATATGATCCTAAGTGGGTTCATGCACAGGATGCTTGTGACCATAAAGGTTCAAAAGAACAAGGTGGTGTTGGACCATTTGGGCTTTTGACTTTAGCTACTGAAAAACTAGAGGAGTTTACTCCTGTGTTTTTCAGAATTTTCAAAGATCAAAATAAGCATGTGATTCTCATGTGCTCTGATGCAAGAAGTTCCTCTTTGAAGAGTAAATTGTACAAGCCTGCATTTGCAGGTTTTGTAGACTTGGATTTGACAACTAACAAGAAAATTTCTCTTAGGAGTTTGATTGATCACTCAGTAGTGGAAAGTTTTGGAGAAGGAGGAAAGACAAACATATTGTCTCGAGTTTATCCACAGCTTGCAGTGGCAAGTCAAGCTCATCTTTTTGTGTTCAACAATGGCACTGAACCAATCACCGTGGAAAATCTAAAAGCATGGAACATGAAATCTGCTAATATAAAATGA 1719 0.4293 MVSPNSSTIFLFLLSLLLLINNGVQAFHKVYPHLQSVSVLSIGAQHRTGYHFQPPKNWINDPNGPMYYNGIYHFFYQYNPKGSVWGNIVWAHSVSKDLINWEAVEHAIYPSKPFDKYGCWSGSATVVPGKGPIILYTGVKDEAQNQVQCYAVPEDPKDPYLRKWVKPDNLNPILVPDKEVNGSAFRDPTTAWWSKDGHWRILVGSRRKERGVAYLYRSKDFKTWVRAKHPLHSKGDTGMWECPDFYPVPLKNNLGLDSVVDGKQVKFVLKNSLDLTRYDYYTIGSYDKDKYVPDNTSEDGWGGLRYDYGNFYASKSFFDPSKKRRVIWGWANESDTTDDDVLKGWAGIQAIPRTVWLDPNGRQLLQWPVEELDSLRGKEVNMKSQKLEKGVNVEVKGITAAQADVEVKFSFSSLDKAEPYDPKWVHAQDACDHKGSKEQGGVGPFGLLTLATEKLEEFTPVFFRIFKDQNKHVILMCSDARSSSLKSKLYKPAFAGFVDLDLTTNKKISLRSLIDHSVVESFGEGGKTNILSRVYPQLAVASQAHLFVFNNGTEPITVENLKAWNMKSANIK* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1985 572 SMART glyco_32 51 526 IPR001362 GO:0004553|GO:0005975
Pvu1g1985 572 CDD GH32_Fruct1-like 57 357 - -
Pvu1g1985 572 SUPERFAMILY Arabinanase/levansucrase/invertase 44 369 IPR023296 -
Pvu1g1985 572 Gene3D - 382 566 - -
Pvu1g1985 572 Pfam Glycosyl hydrolases family 32 C terminal 371 565 IPR013189 -
Pvu1g1985 572 ProSitePatterns Glycosyl hydrolases family 32 active site. 51 64 IPR018053 GO:0004553|GO:0005975
Pvu1g1985 572 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE PROTEIN 11 572 - -
Pvu1g1985 572 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 11 572 - -
Pvu1g1985 572 Gene3D Glycosyl hydrolase domain; family 43 55 381 IPR023296 -
Pvu1g1985 572 Pfam Glycosyl hydrolases family 32 N-terminal domain 51 368 IPR013148 -
Pvu1g1985 572 SUPERFAMILY Concanavalin A-like lectins/glucanases 368 569 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1985 Pvu-Chr1 45742815 45746601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1985 23 566 Glycoside Hydrolase AT2G36190 64.464 0.0 739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1985 K01193 - gmx:100799008 973.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1985 1 45742815 45746601 Pvu1g1985 1 45742815 45746601 ECH