LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu1g1982	ATGACGGAAGTGCTTCAGTTGCCTTCATCGTCAAGCTGTGGTGGTCTCACACCCAATGATGGGTCGCACCCAAGTTCGCTTATTAACGCTCCCACTGTGGAAGAAGTGGTGCTGCCAGAGTCCCCTTTGGATTTGGAAGCTGAAGAAGAGGAAGAAGAAGAAGAAGAGAGAAAAAGGGAAAGAGAAAGGGATCAGCTTTCCATTTTGACCCTTTTGATAGCTACGTTTCGGAAGTCTCTGATTGGGTGCAGCACTACAGCTTCCTCATCGTCATCTTCTTCTTCTTCTTCTTCCATGGAGATTGGGTGGCCTTCCAATGTGAGACACGTGGCTCATGTCACCTTCGATCGCTTCCATGGTTTTCTTGGTTTGCCTGTTGAGTTTGAACCCGAAGTTCCCAGGAGGTCCCCCAGTGCTAGCGCAAATGTTTTTGGAGTTTCAACAGAATCTATGCAGCTTTCTTTTGACGCCAGAGGAAATAGTGTACCTACAATACTGCTGTTAATGCAAAGACATTTGTATGCACAAGGAGGCCTGCAGGCTGAAGGAATCTTCAGAATCAATGCTGAAAATGGTCAAGAGGAGTTTGTGAGGGAACAATTAAACAGAGGAGTTGTACCTGATGGCATTGATGTGCATTGCTTGGCAGGTCTCATAAAGGCTTGGTTCAGAGAACTACCTACTGGGGTATTGGACCCTCTCTCACCTGAGCAGGTGATGCAATCCCAGTCAGAAGAAGAATGTGCTCAGCTTGTGAGGCTTCTTCCTCCAACAGAAGCTGCTTTGCTAGATTGGGCAATAAACTTAATGGCAGATGTTGCTCAAATGGAAAACTTGAACAAGATGAATGCACGTAATGTTGCAATGGTTTTTGCACCAAACATGACCCAAATGGCGGATCCTTTGACTGCTTTGATGTATGCCGTACAAGTCATGAATTTTCTGAAGACACTGGTCGTAAAGACACTTAAGGAAAGGGAGGAGTCTATTGTAAAATCAAATCCTGGTCGAAACCTTAATTCTTTTGACGATGATGGACACCATAGCAATTCAGAAATGCTACACAAGGATGGCAGTGAAAGTGGAAATGATTGTAGTGACGAAGATGAAGATGCATTATTTGTCGCTGCAGAGCCGTTTCAACAAAGCCCTAGTCATCTTATAGAAGATGGCTGTGAAACTGAATCCAAAAGGTTGCCAACATCTACTGAAAATCTTATTTCTAGTGGAAATAGGTTGTTGGTTGGCAGTTGTCCTTGCAATCTTGTGTCTCAAATTTGCTCTTTGGCAATTGGGCTTCAAGACTATGGCCTCACTACTGGGCAGACAAAGGGGGATCAAGCAAAATTTTGCAGGAGCAAAAGCCTTCAGTTGAGTACTTATGATATAGACAAATGTTCCAATAAGGTGATTGAGCTTCCGGTAGCAGGAGCTGCAGAGAAGAACCGCGGAACCGCCATTATTGGGCGTATAAATTCAAGAACGGAGTTGGCTGAAGCTTGGCGTTGA	1509	0.4467	MTEVLQLPSSSSCGGLTPNDGSHPSSLINAPTVEEVVLPESPLDLEAEEEEEEEEERKRERERDQLSILTLLIATFRKSLIGCSTTASSSSSSSSSSSMEIGWPSNVRHVAHVTFDRFHGFLGLPVEFEPEVPRRSPSASANVFGVSTESMQLSFDARGNSVPTILLLMQRHLYAQGGLQAEGIFRINAENGQEEFVREQLNRGVVPDGIDVHCLAGLIKAWFRELPTGVLDPLSPEQVMQSQSEEECAQLVRLLPPTEAALLDWAINLMADVAQMENLNKMNARNVAMVFAPNMTQMADPLTALMYAVQVMNFLKTLVVKTLKEREESIVKSNPGRNLNSFDDDGHHSNSEMLHKDGSESGNDCSDEDEDALFVAAEPFQQSPSHLIEDGCETESKRLPTSTENLISSGNRLLVGSCPCNLVSQICSLAIGLQDYGLTTGQTKGDQAKFCRSKSLQLSTYDIDKCSNKVIELPVAGAAEKNRGTAIIGRINSRTELAEAWR*	503

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu1g1982	502	SMART	PBD_5	101	135	IPR000095	-
	Pvu1g1982	502	MobiDBLite	consensus disorder prediction	1	62	-	-
	Pvu1g1982	502	MobiDBLite	consensus disorder prediction	41	55	-	-
	Pvu1g1982	502	MobiDBLite	consensus disorder prediction	341	362	-	-
	Pvu1g1982	502	Gene3D	Rho GTPase activation protein	133	333	IPR008936	GO:0007165
	Pvu1g1982	502	CDD	RhoGAP	163	318	-	-
	Pvu1g1982	502	Coils	Coil	43	65	-	-
	Pvu1g1982	502	MobiDBLite	consensus disorder prediction	331	367	-	-
	Pvu1g1982	502	CDD	CRIB	99	139	-	-
	Pvu1g1982	502	SUPERFAMILY	GTPase activation domain, GAP	141	319	IPR008936	GO:0007165
	Pvu1g1982	502	PANTHER	RHO GTPASE-ACTIVATING PROTEIN 1	1	502	-	-
	Pvu1g1982	502	ProSiteProfiles	Rho GTPase-activating proteins domain profile.	146	331	IPR000198	GO:0007165
	Pvu1g1982	502	ProSiteProfiles	CRIB domain profile.	101	114	IPR000095	-
	Pvu1g1982	502	Gene3D	CRIB domain	95	130	IPR036936	-
	Pvu1g1982	502	SMART	RhoGAP_3	160	323	IPR000198	GO:0007165
	Pvu1g1982	502	PANTHER	MKIAA1688 PROTEIN	1	502	IPR044785	GO:0005096
	Pvu1g1982	502	Pfam	RhoGAP domain	163	297	IPR000198	GO:0007165
	Pvu1g1982	502	MobiDBLite	consensus disorder prediction	1	29	-	-
	Pvu1g1982	502	Pfam	P21-Rho-binding domain	100	127	IPR000095	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu1g1982	Pvu-Chr1	45707640	45712437	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu1g1982	-		-	gmx:100783118	837.025

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu1g1982	1	45707640	45712437	Pvu1g1982	1	45707640	45712437	ECH