Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1977 ATGTCGGGGAAGAGAAAGAGGAAGTTGAAATTGGACATGAGGCATTCCCCACGGTTTCAATGCCGGATCAGTACGGATTTGCAGGATATGCTAAGCGACACAATCACAGATAATAGAAGAGCAGTTGATGAGGGGAAAAGTGAAAATTTGGAGCTGCAATCCTGGGCTGATCTCCCTGCTGAACTCTTAGAATTAATCTTGTCCCGATTGATCCTTGCTGATAACATCCGTGCTTCTTCTGTTTGCAAGAGATGGCATTCTGTTGCTAGTGATGTCCGTATAGTAAGCCAATCACCATGGCTTATGTATTTTCCAAAATTTGGTGACTGTTATGAATTCTATGATCCTGTGCAGCGTAAGACCTACACCCTTGAGTTGCCAGAGTTGAATGGATCCAGAGTTTGTTATACAAAAGATGGTTGGTTATTGCTATACCGTCCCAGAACTCACCGAGTATTCTTCTTTAATCCCTTCACTCGGGAGCTGATAAAACTGCCAAGATTTGAGATGACATACCAGATTGTGGCCTTCTCTTGTGCTCCAACATCACCTGACTGTGTTCTGTTTACTGTTAAGCATGTTAGTCCTACTGTTGTAGCTATTAGCACTTGTTATCCTGGGGCAACAGAATGGACCACTATCAATCACCCAAACCGCTTGCCCTTTGTCAGTAGCATTTGGAATAAGCTTGTCTTTTGTAATGGGTTATTTTATTGTTTGAGCCTCACAGGTTGGCTTGGGGTGTTTGACCCAGTTGAATGTATTTGGAATGTTCTGGCAGTACCTCCACCTAAATGCCCAGAGAATTTTTTTGCCAAAAACTGGTGGAAGGGTAAATTTATGACAGAGCATGGAGGAGATATATTAGTAATTTATACATGCTGTAGTGAAAACCCCATTATTTTTAAGTTAGATCAGACATTAATGAAATGGGAAGAGATGAGAACTCTAGATGGAGTTACTCTTTTTGCTAGTTTTTTGTCATCTCATTCCAGGACTGACCTAATTGGAATAATGAGGAACAATGTCTACTTCTCTAAAGTTCGTTTCTATGGAAAGCGTTGCATATCATTCTCTCTTGATGACTATAGATACTATCCCCGTAAACAGTGTCATGACTGGGGAGAACAAGACCCTTTTGAGAACATCTGGATTGAACCACCAAAGGACTTTTCTGTTTGCATGTGA 1188 0.4116 MSGKRKRKLKLDMRHSPRFQCRISTDLQDMLSDTITDNRRAVDEGKSENLELQSWADLPAELLELILSRLILADNIRASSVCKRWHSVASDVRIVSQSPWLMYFPKFGDCYEFYDPVQRKTYTLELPELNGSRVCYTKDGWLLLYRPRTHRVFFFNPFTRELIKLPRFEMTYQIVAFSCAPTSPDCVLFTVKHVSPTVVAISTCYPGATEWTTINHPNRLPFVSSIWNKLVFCNGLFYCLSLTGWLGVFDPVECIWNVLAVPPPKCPENFFAKNWWKGKFMTEHGGDILVIYTCCSENPIIFKLDQTLMKWEEMRTLDGVTLFASFLSSHSRTDLIGIMRNNVYFSKVRFYGKRCISFSLDDYRYYPRKQCHDWGEQDPFENIWIEPPKDFSVCM* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1977 395 PANTHER OS09G0392200 PROTEIN 38 391 IPR044619 -
Pvu1g1977 395 SUPERFAMILY F-box domain 49 147 IPR036047 GO:0005515
Pvu1g1977 395 PANTHER OS09G0392200 PROTEIN 38 391 - -
Pvu1g1977 395 Pfam F-box-like 55 91 IPR001810 GO:0005515
Pvu1g1977 395 SMART fbox_2 58 98 IPR001810 GO:0005515
Pvu1g1977 395 Gene3D - 54 94 - -
Pvu1g1977 395 ProSiteProfiles F-box domain profile. 52 103 IPR001810 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1977 - - gmx:100796538 733.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1977 1 45679776 45683623 Pvu1g1977 1 45679776 45683623 ECH