Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1975 ATGGGCTGCGTCTCTTCAAAACTCGTCAAGAGAGAACTCAAGCAAGAACAAGTTACTATCACAAATGGCGGCGGTTACATGAACCACATCGTTTCCCTCACTTCCTCCACCTATGGAGCACTCATGTTGGACAAGGAGAAGGAGCAACCCCTACCAGTTGAAGAATCCAAAACCGCCAAAGTATCTCCTCCTCGGAATCGCGAAGAACCCGAAGTGATCAACGCTTGGGAACTCATGGAGGGTCTCGAAGAGGGAGTGCCCATTTCAAACCACCCTAAGAAAAGCCCCAAGTCCACACCTTTCCTTCGTGGGTTCCTCGCTACTGACACCAAAACCCCCTTGAAGTTTCTCAACCAATTTGGGTCACCGAGGAGTCTTAAGAAGTTCACAGGGAAGGAGAACAAGGCTCAAGGTCAAGCCAATGGCGGTGTAAGACGCTTGGATTACAATGTTAGTCCTAAGGGGATCCTCAAATCTTCTAATTTTTCTTCTCCCTTAAAAGCGTCTCCGATTCGTGCTCGAAGGAACAGTTTCGGCAGTGACACAAAGAGGAGGAGTCCTAGCCCTCTGTTTGATCCAGAGCTTCTGGCCTCCTACGAAAAAGAACTCACCGAAGAGGAAGAACAGATCAAGAGAATGGTGTGGGCCACCCCCAGAACCCGAAGGGTCAGAAAATCTTTGGACACACAAACTTTTGTTAACACCTTTGAGGAAAAGTGTCCACCCAAAGGGGAAAATTGCGTTGTCATTTACACCACCACGTTGCGGGGGATCAGACAGACGTTTGAGGAATGTAATAAAGTTAGGTCCATTGTTGAGTCCTATTGCGTGCATGTGATTGAGAGAGACGTGTCAATGGATTCAGGGTTTAAGGAGGAGTTGCGGAAGCTGATGGGGACGAAGCAAGTTAAGGTTCCGGTTGTGTTTGTGAAGGGAAGGTTGGTTGGGGGAGCTGAGGAAGTTGTGAAGTTGGAAGAAGAGGGAAAGTTGGGTGTTCTCTTTGAGGGGATTCTTCCCAAGACGTTGGGTGATTGTGAAGGGTGTGGTGGAATGAGGTTTGTGATGTGTGTGGAGTGTAATGGAAGTTGTAAGGTTTTGGATGAGGAATGCAAGAAGAATGTGAGGTGTGGTCACTGCAATGAGAATGGACTGGTTCAATGCCCTTTGTGTCGTTAA 1176 0.4796 MGCVSSKLVKRELKQEQVTITNGGGYMNHIVSLTSSTYGALMLDKEKEQPLPVEESKTAKVSPPRNREEPEVINAWELMEGLEEGVPISNHPKKSPKSTPFLRGFLATDTKTPLKFLNQFGSPRSLKKFTGKENKAQGQANGGVRRLDYNVSPKGILKSSNFSSPLKASPIRARRNSFGSDTKRRSPSPLFDPELLASYEKELTEEEEQIKRMVWATPRTRRVRKSLDTQTFVNTFEEKCPPKGENCVVIYTTTLRGIRQTFEECNKVRSIVESYCVHVIERDVSMDSGFKEELRKLMGTKQVKVPVVFVKGRLVGGAEEVVKLEEEGKLGVLFEGILPKTLGDCEGCGGMRFVMCVECNGSCKVLDEECKKNVRCGHCNENGLVQCPLCR* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1975 391 SUPERFAMILY Thioredoxin-like 241 335 IPR036249 -
Pvu1g1975 391 Coils Coil 196 216 - -
Pvu1g1975 391 PANTHER GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED 1 390 - -
Pvu1g1975 391 MobiDBLite consensus disorder prediction 47 68 - -
Pvu1g1975 391 PANTHER EMB|CAB85507.1 1 390 - -
Pvu1g1975 391 ProSiteProfiles Glutaredoxin domain profile. 236 341 - -
Pvu1g1975 391 CDD GRX_GRX_like 248 387 - -
Pvu1g1975 391 Pfam Glutaredoxin 248 315 IPR002109 -
Pvu1g1975 391 Gene3D Glutaredoxin 244 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1975 Pvu-Chr1 45660533 45662027 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1975 K17479 - gmx:121174128 627.861