Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1973 ATGTTTCCTGTTTGCAACCTTTCTCCTCTTTCTCTGCAACCGGTCAGGGTGGTTCCGATTCCCGGAAAACCTACCAGACACTCTTCGTTTCTCTCGGTCACCAACTCCGGCGAGAGAATCAGCACGCGCAAAAGTAACATTTCGCCATTCGAATCGCGAATCTCACTCGTTTTCGCTCTCGCTTCTCAAGCCAACTCTCTCTCCCAGCGACTTCTAACTGACGTCGCTGCCGAGACTGCCAAATACTTATTTCCGAAGAGATTCGAAAGCCGTAATCTCGAGGAGGCGTTGATGAGTGTTCCGGACCTTGAGACTGTCGTGTTCAAAGTTCTGAGTAGAAGGGACCAGTATGAGATTAGGGAAGTTGAGCCTTACTTTGTGGCAGAGGCAACAATGCCTGGGAAGAGGGGATTTGATTTCAATGGTGCTTCTCAGTCCTTTAATGTCTTAGCTGAGTACCTTTTCGGTAAGAATACAAAGAATGAGAAAATGGAGATGACTACACCTGTTTTCACAAGTAAGAATCAATCTGAAGGGGTTAAAATGGATATGACAACTCCTGTGTTGACAACAAAGATTGGAGATCAAGACAAGTGGAGAATGTCTTTCGTCATGCCATCAAAGTATGGTGCTAACTTGCCACTGCCTAAAGATTCCTCTGTGACAATTAAAGAGGTGCCCAGAAAAATCGTTGCTGTAGTCTCCTTTTCAGGTTTTGTGAACGATGAACAAATTAAGCAGCGCGAACTGAAATTACGAGAAGCTTTAAAAAGTGACAGTCAGTTTAAAATTAAAGAGGGAACTTCAATAGAAGTTGCACAGTATAATCCACCGTTTACTCTTCCATTTCAACGCCGTAATGAGATTGCATTGGAGGTGGAATGGAATAATAAGTAG 897 0.4381 MFPVCNLSPLSLQPVRVVPIPGKPTRHSSFLSVTNSGERISTRKSNISPFESRISLVFALASQANSLSQRLLTDVAAETAKYLFPKRFESRNLEEALMSVPDLETVVFKVLSRRDQYEIREVEPYFVAEATMPGKRGFDFNGASQSFNVLAEYLFGKNTKNEKMEMTTPVFTSKNQSEGVKMDMTTPVLTTKIGDQDKWRMSFVMPSKYGANLPLPKDSSVTIKEVPRKIVAVVSFSGFVNDEQIKQRELKLREALKSDSQFKIKEGTSIEVAQYNPPFTLPFQRRNEIALEVEWNNK* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1973 298 Pfam SOUL heme-binding protein 103 291 IPR006917 -
Pvu1g1973 298 SUPERFAMILY Probable bacterial effector-binding domain 98 173 IPR011256 -
Pvu1g1973 298 PANTHER OS02G0533200 PROTEIN 38 297 - -
Pvu1g1973 298 Gene3D Regulatory factor, effector binding domain 102 176 IPR011256 -
Pvu1g1973 298 Gene3D Regulatory factor, effector binding domain 177 298 IPR011256 -
Pvu1g1973 298 PANTHER HEME-BINDING PROTEIN-RELATED 38 297 IPR006917 -
Pvu1g1973 298 SUPERFAMILY Probable bacterial effector-binding domain 174 293 IPR011256 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1973 Pvu-Chr1 45637600 45642873 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1973 - - gmx:100797412 503.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1973 1 45637600 45642873 Pvu1g1973 1 45637600 45642873 ECH