Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1970 ATGCCTGCGATCCCCGAAGAACCACTCCTGGCCCCGAACCCAGACCGCTTCTGCATGTTCCCAATCCAATACCCCCAAATATGGGAAATGTACAAGAAAGCCGAAGCCTCTTTCTGGACCGCCGAAGAGGTTGACCTTTCCCAAGACCTCCGCCACTGGGACTCCCTCACCGACGGCGAGCGCCACTTCATCACCCACGTCCTCGCCTTCTTTGCCGCCTCCGACGGTATCGTTCTCGAAAACCTCGCCGCCCGCTTCATGAAGGAAATCCAAGTCTCCGAGGCCCGTGCTTTCTACGGCTTCCAGATCGCCATCGAGAACATCCACTCCGAGATGTACAGCCTCCTCTTGGAAACCTACATCAAAGACTCCACCGAAAAGAACCACCTGTTCCGTGCCGTAGACACCATCCCCTGCGTCGCCAAGAAGGCACAGTGGGCCTTGCGCTGGATCGACGCCACCGACTCTTTCGCCGAGCGCATCGTCGCCTTCGCCTGCGTCGAGGGAATCTTCTTCTCTGGCAGCTTCTGCTCGATATTCTGGCTCAAGAAGCGCGGTTTGATGCCCGGTCTCACCTTCTCCAACGAACTCATATCGCGAGATGAAGGGCTTCACTGCGACTTCGCGTGCCTCTTGTACTCTCTCCTCAGAAAGAAGCTCACTGAGGAGCGCGTGAAGGAGATTGTGCGCGACGCGGTTGACATAGAGAGGGAATTTGTGTGCGACGCGCTTCCCTGCGCTTTGGTGGGTATGAATGGGGAGCTGATGAGTCAGTATATTGAGTTTGTTGCGGATCGGTTGCTGGGTGCGCTTGGGTGTGGGAAGGTGTACGATGTTCAGAATCCCTTTGATTGGATGGAGCTTATATCACTCCAGGGGAAAACCAACTTCTTTGAAAAGCGCGTTGGAGACTATCAGAAGGCTTCTGTTATGTCTAGCTTGAACGGAAATGGAGGGGCACATGTGTTCAACATGGATGAGGATTTTTAA 990 0.5465 MPAIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWDSLTDGERHFITHVLAFFAASDGIVLENLAARFMKEIQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSTEKNHLFRAVDTIPCVAKKAQWALRWIDATDSFAERIVAFACVEGIFFSGSFCSIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLTEERVKEIVRDAVDIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVYDVQNPFDWMELISLQGKTNFFEKRVGDYQKASVMSSLNGNGGAHVFNMDEDF* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1970 329 Gene3D Ribonucleotide Reductase, subunit A 3 307 IPR012348 GO:0016491
Pvu1g1970 329 Pfam Ribonucleotide reductase, small chain 16 282 IPR000358 GO:0009263
Pvu1g1970 329 Coils Coil 218 238 - -
Pvu1g1970 329 PANTHER RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN 5 329 - -
Pvu1g1970 329 CDD RNRR2 17 291 IPR033909 GO:0009263
Pvu1g1970 329 PIRSF NrdB 6 316 IPR000358 GO:0009263
Pvu1g1970 329 SUPERFAMILY Ferritin-like 5 307 IPR009078 -
Pvu1g1970 329 PANTHER RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN 5 329 IPR000358 GO:0009263
Pvu1g1970 329 ProSitePatterns Ribonucleotide reductase small subunit signature. 105 121 IPR030475 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1970 Pvu-Chr1 45626171 45627455 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1970 K10808 - gmx:100790224 638.262